Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC23.76■■□□□ 1.39
RIPK4P57078 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
RIPK4P57078 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
RIPK4P57078 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RIPK4P57078 CIB2-208ENST00000560618 804 ntTSL 2 BASIC23.76■■□□□ 1.39
RIPK4P57078 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
RIPK4P57078 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RIPK4P57078 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RIPK4P57078 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RIPK4P57078 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RIPK4P57078 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC23.76■■□□□ 1.39
RIPK4P57078 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC23.76■■□□□ 1.39
RIPK4P57078 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RIPK4P57078 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC23.75■■□□□ 1.39
RIPK4P57078 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RIPK4P57078 EFTUD1P1-204ENST00000560401 1798 ntBASIC23.75■■□□□ 1.39
RIPK4P57078 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC23.75■■□□□ 1.39
RIPK4P57078 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RIPK4P57078 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
RIPK4P57078 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RIPK4P57078 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RIPK4P57078 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RIPK4P57078 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RIPK4P57078 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RIPK4P57078 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RIPK4P57078 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
RIPK4P57078 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RIPK4P57078 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC23.75■■□□□ 1.39
RIPK4P57078 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC23.75■■□□□ 1.39
RIPK4P57078 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
RIPK4P57078 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RIPK4P57078 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RIPK4P57078 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
RIPK4P57078 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RIPK4P57078 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RIPK4P57078 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
RIPK4P57078 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RIPK4P57078 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC23.74■■□□□ 1.39
RIPK4P57078 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC23.74■■□□□ 1.39
RIPK4P57078 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC23.74■■□□□ 1.39
RIPK4P57078 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RIPK4P57078 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RIPK4P57078 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC23.74■■□□□ 1.39
RIPK4P57078 LINC00265-3P-201ENST00000447588 903 ntBASIC23.74■■□□□ 1.39
RIPK4P57078 TOB2P1-201ENST00000469761 992 ntBASIC23.74■■□□□ 1.39
RIPK4P57078 AC091607.1-201ENST00000490318 1060 ntBASIC23.74■■□□□ 1.39
RIPK4P57078 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
RIPK4P57078 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC23.74■■□□□ 1.39
RIPK4P57078 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC23.74■■□□□ 1.39
RIPK4P57078 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC23.74■■□□□ 1.39
RIPK4P57078 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC23.74■■□□□ 1.39
RIPK4P57078 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC23.74■■□□□ 1.39
RIPK4P57078 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC23.74■■□□□ 1.39
RIPK4P57078 AC009154.2-201ENST00000621177 724 ntBASIC23.74■■□□□ 1.39
RIPK4P57078 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
RIPK4P57078 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC23.74■■□□□ 1.39
RIPK4P57078 FLYWCH1P1-201ENST00000460917 1874 ntBASIC23.74■■□□□ 1.39
RIPK4P57078 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RIPK4P57078 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC23.74■■□□□ 1.39
RIPK4P57078 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
RIPK4P57078 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RIPK4P57078 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
RIPK4P57078 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RIPK4P57078 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
RIPK4P57078 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
RIPK4P57078 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC23.74■■□□□ 1.39
RIPK4P57078 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
RIPK4P57078 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
RIPK4P57078 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
RIPK4P57078 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC23.73■■□□□ 1.39
RIPK4P57078 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RIPK4P57078 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
RIPK4P57078 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RIPK4P57078 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RIPK4P57078 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RIPK4P57078 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RIPK4P57078 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
RIPK4P57078 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
RIPK4P57078 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC23.73■■□□□ 1.39
RIPK4P57078 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC23.73■■□□□ 1.39
RIPK4P57078 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC23.73■■□□□ 1.39
RIPK4P57078 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RIPK4P57078 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RIPK4P57078 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RIPK4P57078 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RIPK4P57078 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC23.73■■□□□ 1.39
RIPK4P57078 ANKRD20A8P-203ENST00000641373 517 ntBASIC23.73■■□□□ 1.39
RIPK4P57078 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC23.73■■□□□ 1.39
RIPK4P57078 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC23.73■■□□□ 1.39
RIPK4P57078 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
RIPK4P57078 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RIPK4P57078 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC23.73■■□□□ 1.39
RIPK4P57078 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
RIPK4P57078 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RIPK4P57078 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RIPK4P57078 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RIPK4P57078 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC23.72■■□□□ 1.39
RIPK4P57078 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC23.72■■□□□ 1.39
RIPK4P57078 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RIPK4P57078 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms