Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHB3P54753 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHB3P54753 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.96■□□□□ 0.63
EPHB3P54753 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.96■□□□□ 0.63
EPHB3P54753 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.96■□□□□ 0.63
EPHB3P54753 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.96■□□□□ 0.63
EPHB3P54753 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
EPHB3P54753 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
EPHB3P54753 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
EPHB3P54753 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHB3P54753 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.96■□□□□ 0.63
EPHB3P54753 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHB3P54753 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
EPHB3P54753 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB3P54753 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB3P54753 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB3P54753 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.95■□□□□ 0.62
EPHB3P54753 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB3P54753 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
EPHB3P54753 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB3P54753 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB3P54753 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB3P54753 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB3P54753 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.95■□□□□ 0.62
EPHB3P54753 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB3P54753 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.95■□□□□ 0.62
EPHB3P54753 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB3P54753 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.95■□□□□ 0.62
EPHB3P54753 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB3P54753 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.95■□□□□ 0.62
EPHB3P54753 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.95■□□□□ 0.62
EPHB3P54753 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.95■□□□□ 0.62
EPHB3P54753 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB3P54753 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.95■□□□□ 0.62
EPHB3P54753 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.95■□□□□ 0.62
EPHB3P54753 AL138831.2-201ENST00000606564 490 ntBASIC18.95■□□□□ 0.62
EPHB3P54753 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.95■□□□□ 0.62
EPHB3P54753 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB3P54753 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHB3P54753 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHB3P54753 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
EPHB3P54753 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHB3P54753 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHB3P54753 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
EPHB3P54753 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHB3P54753 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHB3P54753 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.94■□□□□ 0.62
EPHB3P54753 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.94■□□□□ 0.62
EPHB3P54753 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.94■□□□□ 0.62
EPHB3P54753 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.94■□□□□ 0.62
EPHB3P54753 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.94■□□□□ 0.62
EPHB3P54753 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.94■□□□□ 0.62
EPHB3P54753 AC008608.2-201ENST00000606089 416 ntBASIC18.94■□□□□ 0.62
EPHB3P54753 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
EPHB3P54753 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHB3P54753 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.94■□□□□ 0.62
EPHB3P54753 BCL2-203ENST00000589955 5011 ntBASIC18.94■□□□□ 0.62
EPHB3P54753 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHB3P54753 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.94■□□□□ 0.62
EPHB3P54753 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHB3P54753 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHB3P54753 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHB3P54753 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHB3P54753 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB3P54753 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
EPHB3P54753 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB3P54753 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB3P54753 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB3P54753 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.93■□□□□ 0.62
EPHB3P54753 AC125634.1-201ENST00000438758 1403 ntBASIC18.93■□□□□ 0.62
EPHB3P54753 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB3P54753 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB3P54753 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB3P54753 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
EPHB3P54753 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.93■□□□□ 0.62
EPHB3P54753 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB3P54753 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB3P54753 FAM197Y8-203ENST00000450145 560 ntBASIC18.93■□□□□ 0.62
EPHB3P54753 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.93■□□□□ 0.62
EPHB3P54753 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.93■□□□□ 0.62
EPHB3P54753 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
EPHB3P54753 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
EPHB3P54753 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
EPHB3P54753 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.93■□□□□ 0.62
EPHB3P54753 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.93■□□□□ 0.62
EPHB3P54753 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
EPHB3P54753 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB3P54753 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB3P54753 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.93■□□□□ 0.62
EPHB3P54753 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.93■□□□□ 0.62
EPHB3P54753 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB3P54753 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.93■□□□□ 0.62
EPHB3P54753 AC138932.1-201ENST00000534164 6830 ntBASIC18.93■□□□□ 0.62
EPHB3P54753 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.93■□□□□ 0.62
EPHB3P54753 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.93■□□□□ 0.62
EPHB3P54753 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB3P54753 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.92■□□□□ 0.62
EPHB3P54753 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB3P54753 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
EPHB3P54753 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms