Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
USP11P51784 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP11P51784 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.52■□□□□ 0.88
USP11P51784 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP11P51784 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.52■□□□□ 0.88
USP11P51784 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP11P51784 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.52■□□□□ 0.88
USP11P51784 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP11P51784 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP11P51784 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP11P51784 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.52■□□□□ 0.88
USP11P51784 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.52■□□□□ 0.88
USP11P51784 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.52■□□□□ 0.88
USP11P51784 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.52■□□□□ 0.88
USP11P51784 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.52■□□□□ 0.88
USP11P51784 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
USP11P51784 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.52■□□□□ 0.87
USP11P51784 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.51■□□□□ 0.87
USP11P51784 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.51■□□□□ 0.87
USP11P51784 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP11P51784 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.51■□□□□ 0.87
USP11P51784 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP11P51784 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.51■□□□□ 0.87
USP11P51784 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
USP11P51784 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.51■□□□□ 0.87
USP11P51784 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP11P51784 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP11P51784 DRAXINP1-201ENST00000437611 948 ntBASIC20.51■□□□□ 0.87
USP11P51784 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.51■□□□□ 0.87
USP11P51784 MIR3180-1-201ENST00000580374 94 ntBASIC20.51■□□□□ 0.87
USP11P51784 MIR3180-3-201ENST00000584616 94 ntBASIC20.51■□□□□ 0.87
USP11P51784 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP11P51784 AL353801.3-201ENST00000609898 542 ntBASIC20.51■□□□□ 0.87
USP11P51784 AC124864.1-201ENST00000623408 392 ntBASIC20.51■□□□□ 0.87
USP11P51784 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP11P51784 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP11P51784 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP11P51784 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
USP11P51784 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.51■□□□□ 0.87
USP11P51784 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP11P51784 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.51■□□□□ 0.87
USP11P51784 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP11P51784 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.51■□□□□ 0.87
USP11P51784 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP11P51784 AC135050.7-201ENST00000624508 2218 ntBASIC20.5■□□□□ 0.87
USP11P51784 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP11P51784 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP11P51784 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP11P51784 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP11P51784 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
USP11P51784 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP11P51784 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
USP11P51784 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.5■□□□□ 0.87
USP11P51784 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.5■□□□□ 0.87
USP11P51784 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
USP11P51784 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.5■□□□□ 0.87
USP11P51784 AL592071.1-201ENST00000611956 408 ntBASIC20.5■□□□□ 0.87
USP11P51784 ABALON-201ENST00000629058 1903 ntBASIC20.5■□□□□ 0.87
USP11P51784 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
USP11P51784 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.5■□□□□ 0.87
USP11P51784 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.5■□□□□ 0.87
USP11P51784 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
USP11P51784 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.5■□□□□ 0.87
USP11P51784 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
USP11P51784 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
USP11P51784 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP11P51784 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
USP11P51784 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.49■□□□□ 0.87
USP11P51784 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP11P51784 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP11P51784 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP11P51784 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
USP11P51784 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
USP11P51784 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
USP11P51784 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.49■□□□□ 0.87
USP11P51784 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP11P51784 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.49■□□□□ 0.87
USP11P51784 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP11P51784 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP11P51784 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP11P51784 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.49■□□□□ 0.87
USP11P51784 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
USP11P51784 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.49■□□□□ 0.87
USP11P51784 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
USP11P51784 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
USP11P51784 AP002414.4-201ENST00000589764 1148 ntBASIC20.49■□□□□ 0.87
USP11P51784 AC093458.2-201ENST00000623150 629 ntBASIC20.49■□□□□ 0.87
USP11P51784 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.49■□□□□ 0.87
USP11P51784 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
USP11P51784 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP11P51784 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP11P51784 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.49■□□□□ 0.87
USP11P51784 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
USP11P51784 KRT18P1-202ENST00000452408 1331 ntBASIC20.49■□□□□ 0.87
USP11P51784 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
USP11P51784 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.48■□□□□ 0.87
USP11P51784 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP11P51784 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
USP11P51784 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.48■□□□□ 0.87
USP11P51784 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms