Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC22.34■■□□□ 1.17
PDE6BP35913 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PDE6BP35913 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC22.34■■□□□ 1.17
PDE6BP35913 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
PDE6BP35913 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDE6BP35913 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDE6BP35913 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC22.34■■□□□ 1.17
PDE6BP35913 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PDE6BP35913 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PDE6BP35913 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC22.34■■□□□ 1.17
PDE6BP35913 PCDHAC2-203ENST00000615316 3011 ntBASIC22.33■■□□□ 1.17
PDE6BP35913 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PDE6BP35913 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
PDE6BP35913 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
PDE6BP35913 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC22.33■■□□□ 1.17
PDE6BP35913 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC22.33■■□□□ 1.17
PDE6BP35913 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
PDE6BP35913 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC22.33■■□□□ 1.17
PDE6BP35913 KRT18P27-201ENST00000427733 1299 ntBASIC22.33■■□□□ 1.17
PDE6BP35913 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC22.33■■□□□ 1.17
PDE6BP35913 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC22.33■■□□□ 1.17
PDE6BP35913 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PDE6BP35913 BX005266.1-201ENST00000473402 457 ntBASIC22.33■■□□□ 1.17
PDE6BP35913 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC22.33■■□□□ 1.17
PDE6BP35913 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC22.33■■□□□ 1.17
PDE6BP35913 CYGB-205ENST00000590175 830 ntTSL 3 BASIC22.33■■□□□ 1.17
PDE6BP35913 AC064836.3-201ENST00000607928 673 ntBASIC22.33■■□□□ 1.17
PDE6BP35913 AC005593.1-201ENST00000624894 515 ntBASIC22.33■■□□□ 1.17
PDE6BP35913 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
PDE6BP35913 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PDE6BP35913 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC22.33■■□□□ 1.17
PDE6BP35913 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PDE6BP35913 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
PDE6BP35913 AC097374.2-201ENST00000618617 1306 ntBASIC22.32■■□□□ 1.16
PDE6BP35913 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDE6BP35913 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC22.32■■□□□ 1.16
PDE6BP35913 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.32■■□□□ 1.16
PDE6BP35913 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
PDE6BP35913 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
PDE6BP35913 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
PDE6BP35913 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
PDE6BP35913 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC22.32■■□□□ 1.16
PDE6BP35913 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC22.32■■□□□ 1.16
PDE6BP35913 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PDE6BP35913 AC006557.2-201ENST00000592985 1240 ntBASIC22.32■■□□□ 1.16
PDE6BP35913 COPE-211ENST00000600932 1144 ntTSL 5 BASIC22.32■■□□□ 1.16
PDE6BP35913 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC22.32■■□□□ 1.16
PDE6BP35913 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PDE6BP35913 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDE6BP35913 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PDE6BP35913 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDE6BP35913 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.32■■□□□ 1.16
PDE6BP35913 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDE6BP35913 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC22.32■■□□□ 1.16
PDE6BP35913 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC22.31■■□□□ 1.16
PDE6BP35913 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDE6BP35913 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PDE6BP35913 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC22.31■■□□□ 1.16
PDE6BP35913 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PDE6BP35913 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC22.31■■□□□ 1.16
PDE6BP35913 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC22.31■■□□□ 1.16
PDE6BP35913 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDE6BP35913 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
PDE6BP35913 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC22.31■■□□□ 1.16
PDE6BP35913 SLC4A1APP2-201ENST00000424054 1259 ntBASIC22.31■■□□□ 1.16
PDE6BP35913 ETFA-208ENST00000559602 792 ntTSL 3 BASIC22.31■■□□□ 1.16
PDE6BP35913 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC22.31■■□□□ 1.16
PDE6BP35913 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC22.31■■□□□ 1.16
PDE6BP35913 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDE6BP35913 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDE6BP35913 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDE6BP35913 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDE6BP35913 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDE6BP35913 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PDE6BP35913 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC22.31■■□□□ 1.16
PDE6BP35913 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC22.31■■□□□ 1.16
PDE6BP35913 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.31■■□□□ 1.16
PDE6BP35913 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC22.31■■□□□ 1.16
PDE6BP35913 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDE6BP35913 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC22.3■■□□□ 1.16
PDE6BP35913 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDE6BP35913 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDE6BP35913 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDE6BP35913 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDE6BP35913 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PDE6BP35913 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDE6BP35913 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDE6BP35913 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
PDE6BP35913 AC007967.3-201ENST00000434308 558 ntBASIC22.3■■□□□ 1.16
PDE6BP35913 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC22.3■■□□□ 1.16
PDE6BP35913 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC22.3■■□□□ 1.16
PDE6BP35913 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC22.3■■□□□ 1.16
PDE6BP35913 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.3■■□□□ 1.16
PDE6BP35913 TBC1D3P5-201ENST00000579401 1545 ntBASIC22.3■■□□□ 1.16
PDE6BP35913 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC22.3■■□□□ 1.16
PDE6BP35913 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC22.3■■□□□ 1.16
PDE6BP35913 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC22.3■■□□□ 1.16
PDE6BP35913 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
PDE6BP35913 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.3■■□□□ 1.16
PDE6BP35913 KRT18P28-201ENST00000453838 1332 ntBASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms