Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCKBRP32239 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCKBRP32239 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.45■□□□□ 0.38
CCKBRP32239 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.45■□□□□ 0.38
CCKBRP32239 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.45■□□□□ 0.38
CCKBRP32239 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.45■□□□□ 0.38
CCKBRP32239 AP001005.1-201ENST00000571755 1248 ntBASIC17.45■□□□□ 0.38
CCKBRP32239 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.45■□□□□ 0.38
CCKBRP32239 AL773604.1-201ENST00000617417 272 ntBASIC17.45■□□□□ 0.38
CCKBRP32239 AC083906.6-201ENST00000641366 219 ntBASIC17.45■□□□□ 0.38
CCKBRP32239 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.45■□□□□ 0.38
CCKBRP32239 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCKBRP32239 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCKBRP32239 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCKBRP32239 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CCKBRP32239 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.45■□□□□ 0.38
CCKBRP32239 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCKBRP32239 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCKBRP32239 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
CCKBRP32239 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CCKBRP32239 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.45■□□□□ 0.38
CCKBRP32239 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCKBRP32239 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCKBRP32239 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCKBRP32239 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCKBRP32239 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.44■□□□□ 0.38
CCKBRP32239 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.44■□□□□ 0.38
CCKBRP32239 AC009102.3-201ENST00000623118 1491 ntBASIC17.44■□□□□ 0.38
CCKBRP32239 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCKBRP32239 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCKBRP32239 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCKBRP32239 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCKBRP32239 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCKBRP32239 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
CCKBRP32239 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCKBRP32239 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCKBRP32239 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.44■□□□□ 0.38
CCKBRP32239 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCKBRP32239 AC005332.7-201ENST00000614046 2005 ntBASIC17.44■□□□□ 0.38
CCKBRP32239 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCKBRP32239 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCKBRP32239 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
CCKBRP32239 AL590627.1-203ENST00000421194 1026 ntBASIC17.44■□□□□ 0.38
CCKBRP32239 AC096582.2-201ENST00000510860 516 ntBASIC17.44■□□□□ 0.38
CCKBRP32239 RNA5SP419-201ENST00000515908 135 ntBASIC17.44■□□□□ 0.38
CCKBRP32239 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.44■□□□□ 0.38
CCKBRP32239 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.44■□□□□ 0.38
CCKBRP32239 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.44■□□□□ 0.38
CCKBRP32239 AC006538.3-201ENST00000612495 578 ntBASIC17.44■□□□□ 0.38
CCKBRP32239 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCKBRP32239 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CCKBRP32239 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCKBRP32239 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
CCKBRP32239 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCKBRP32239 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
CCKBRP32239 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCKBRP32239 AP000974.1-201ENST00000623909 2387 ntBASIC17.44■□□□□ 0.38
CCKBRP32239 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.44■□□□□ 0.38
CCKBRP32239 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCKBRP32239 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCKBRP32239 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CCKBRP32239 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.43■□□□□ 0.38
CCKBRP32239 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.43■□□□□ 0.38
CCKBRP32239 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCKBRP32239 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCKBRP32239 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCKBRP32239 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCKBRP32239 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CCKBRP32239 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCKBRP32239 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCKBRP32239 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.43■□□□□ 0.38
CCKBRP32239 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCKBRP32239 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CCKBRP32239 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCKBRP32239 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.43■□□□□ 0.38
CCKBRP32239 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCKBRP32239 KRT18P67-201ENST00000432816 1264 ntBASIC17.43■□□□□ 0.38
CCKBRP32239 FAM197Y8-203ENST00000450145 560 ntBASIC17.43■□□□□ 0.38
CCKBRP32239 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCKBRP32239 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.43■□□□□ 0.38
CCKBRP32239 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.43■□□□□ 0.38
CCKBRP32239 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.43■□□□□ 0.38
CCKBRP32239 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.43■□□□□ 0.38
CCKBRP32239 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCKBRP32239 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.43■□□□□ 0.38
CCKBRP32239 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCKBRP32239 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCKBRP32239 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCKBRP32239 AC020763.4-201ENST00000623414 4170 ntBASIC17.43■□□□□ 0.38
CCKBRP32239 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCKBRP32239 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCKBRP32239 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCKBRP32239 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCKBRP32239 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.42■□□□□ 0.38
CCKBRP32239 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCKBRP32239 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
CCKBRP32239 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.42■□□□□ 0.38
CCKBRP32239 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CCKBRP32239 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCKBRP32239 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms