Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASQ1P31415 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
CASQ1P31415 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASQ1P31415 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASQ1P31415 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASQ1P31415 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.56■□□□□ 0.72
CASQ1P31415 KRT18P55-202ENST00000578578 1546 ntBASIC19.56■□□□□ 0.72
CASQ1P31415 AC018695.7-201ENST00000624587 2492 ntBASIC19.56■□□□□ 0.72
CASQ1P31415 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.56■□□□□ 0.72
CASQ1P31415 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASQ1P31415 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASQ1P31415 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.55■□□□□ 0.72
CASQ1P31415 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.55■□□□□ 0.72
CASQ1P31415 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CASQ1P31415 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASQ1P31415 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.55■□□□□ 0.72
CASQ1P31415 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CASQ1P31415 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASQ1P31415 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASQ1P31415 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.55■□□□□ 0.72
CASQ1P31415 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASQ1P31415 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.55■□□□□ 0.72
CASQ1P31415 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CASQ1P31415 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CASQ1P31415 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.55■□□□□ 0.72
CASQ1P31415 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CASQ1P31415 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.55■□□□□ 0.72
CASQ1P31415 PRSS44-201ENST00000515154 1146 ntBASIC19.55■□□□□ 0.72
CASQ1P31415 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.55■□□□□ 0.72
CASQ1P31415 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.55■□□□□ 0.72
CASQ1P31415 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.55■□□□□ 0.72
CASQ1P31415 AC092437.1-201ENST00000624794 1048 ntBASIC19.55■□□□□ 0.72
CASQ1P31415 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASQ1P31415 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CASQ1P31415 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.55■□□□□ 0.72
CASQ1P31415 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.55■□□□□ 0.72
CASQ1P31415 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASQ1P31415 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASQ1P31415 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASQ1P31415 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CASQ1P31415 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CASQ1P31415 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.54■□□□□ 0.72
CASQ1P31415 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CASQ1P31415 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CASQ1P31415 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CASQ1P31415 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CASQ1P31415 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CASQ1P31415 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.54■□□□□ 0.72
CASQ1P31415 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CASQ1P31415 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CASQ1P31415 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.54■□□□□ 0.72
CASQ1P31415 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.54■□□□□ 0.72
CASQ1P31415 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CASQ1P31415 AC008687.6-201ENST00000596318 630 ntBASIC19.54■□□□□ 0.72
CASQ1P31415 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CASQ1P31415 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CASQ1P31415 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CASQ1P31415 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CASQ1P31415 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CASQ1P31415 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.54■□□□□ 0.72
CASQ1P31415 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CASQ1P31415 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CASQ1P31415 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CASQ1P31415 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CASQ1P31415 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CASQ1P31415 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CASQ1P31415 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CASQ1P31415 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CASQ1P31415 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
CASQ1P31415 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CASQ1P31415 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CASQ1P31415 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.53■□□□□ 0.72
CASQ1P31415 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
CASQ1P31415 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.53■□□□□ 0.72
CASQ1P31415 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CASQ1P31415 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CASQ1P31415 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.53■□□□□ 0.72
CASQ1P31415 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CASQ1P31415 AC060766.5-201ENST00000590539 871 ntBASIC19.53■□□□□ 0.72
CASQ1P31415 AC092118.2-201ENST00000613495 667 ntBASIC19.53■□□□□ 0.72
CASQ1P31415 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
CASQ1P31415 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
CASQ1P31415 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.53■□□□□ 0.72
CASQ1P31415 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.53■□□□□ 0.72
CASQ1P31415 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CASQ1P31415 MST1L-201ENST00000442552 2185 ntBASIC19.53■□□□□ 0.72
CASQ1P31415 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CASQ1P31415 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CASQ1P31415 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CASQ1P31415 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.52■□□□□ 0.72
CASQ1P31415 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.52■□□□□ 0.72
CASQ1P31415 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CASQ1P31415 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CASQ1P31415 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CASQ1P31415 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
CASQ1P31415 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.52■□□□□ 0.72
CASQ1P31415 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CASQ1P31415 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CASQ1P31415 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CASQ1P31415 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms