Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNGA1P29973 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
CNGA1P29973 AC092183.1-201ENST00000469884 875 ntBASIC20.66■□□□□ 0.9
CNGA1P29973 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.66■□□□□ 0.9
CNGA1P29973 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.66■□□□□ 0.9
CNGA1P29973 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.66■□□□□ 0.9
CNGA1P29973 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.66■□□□□ 0.9
CNGA1P29973 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.66■□□□□ 0.9
CNGA1P29973 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNGA1P29973 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.66■□□□□ 0.9
CNGA1P29973 ZNF259P1-201ENST00000407656 1365 ntBASIC20.66■□□□□ 0.9
CNGA1P29973 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNGA1P29973 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CNGA1P29973 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNGA1P29973 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CNGA1P29973 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNGA1P29973 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNGA1P29973 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNGA1P29973 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNGA1P29973 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.66■□□□□ 0.9
CNGA1P29973 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.66■□□□□ 0.9
CNGA1P29973 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNGA1P29973 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNGA1P29973 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNGA1P29973 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNGA1P29973 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CNGA1P29973 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNGA1P29973 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNGA1P29973 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNGA1P29973 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNGA1P29973 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNGA1P29973 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CNGA1P29973 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CNGA1P29973 KRT8P50-201ENST00000562022 1438 ntBASIC20.65■□□□□ 0.9
CNGA1P29973 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNGA1P29973 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNGA1P29973 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNGA1P29973 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNGA1P29973 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNGA1P29973 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNGA1P29973 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.65■□□□□ 0.9
CNGA1P29973 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.65■□□□□ 0.9
CNGA1P29973 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNGA1P29973 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.65■□□□□ 0.9
CNGA1P29973 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.65■□□□□ 0.9
CNGA1P29973 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNGA1P29973 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNGA1P29973 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.65■□□□□ 0.9
CNGA1P29973 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.65■□□□□ 0.9
CNGA1P29973 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNGA1P29973 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.65■□□□□ 0.9
CNGA1P29973 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.65■□□□□ 0.9
CNGA1P29973 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.65■□□□□ 0.9
CNGA1P29973 MIR7706-201ENST00000613747 67 ntBASIC20.65■□□□□ 0.9
CNGA1P29973 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNGA1P29973 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CNGA1P29973 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNGA1P29973 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNGA1P29973 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CNGA1P29973 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNGA1P29973 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CNGA1P29973 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNGA1P29973 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNGA1P29973 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.64■□□□□ 0.9
CNGA1P29973 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
CNGA1P29973 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
CNGA1P29973 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CNGA1P29973 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CNGA1P29973 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNGA1P29973 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNGA1P29973 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.64■□□□□ 0.9
CNGA1P29973 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.64■□□□□ 0.9
CNGA1P29973 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.64■□□□□ 0.89
CNGA1P29973 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.64■□□□□ 0.89
CNGA1P29973 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNGA1P29973 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
CNGA1P29973 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CNGA1P29973 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.64■□□□□ 0.89
CNGA1P29973 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CNGA1P29973 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNGA1P29973 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
CNGA1P29973 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNGA1P29973 RCN1P2-201ENST00000398357 915 ntBASIC20.64■□□□□ 0.89
CNGA1P29973 AC018712.1-201ENST00000455767 687 ntBASIC20.64■□□□□ 0.89
CNGA1P29973 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CNGA1P29973 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.64■□□□□ 0.89
CNGA1P29973 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.64■□□□□ 0.89
CNGA1P29973 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.64■□□□□ 0.89
CNGA1P29973 MTDHP3-201ENST00000594186 672 ntBASIC20.64■□□□□ 0.89
CNGA1P29973 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
CNGA1P29973 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CNGA1P29973 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNGA1P29973 AC018445.3-201ENST00000624177 1945 ntBASIC20.64■□□□□ 0.89
CNGA1P29973 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CNGA1P29973 AL357033.4-201ENST00000617703 1807 ntBASIC20.64■□□□□ 0.89
CNGA1P29973 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CNGA1P29973 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.64■□□□□ 0.89
CNGA1P29973 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNGA1P29973 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNGA1P29973 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms