Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.69■□□□□ 0.26
SHC1P29353 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.69■□□□□ 0.26
SHC1P29353 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHC1P29353 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SHC1P29353 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
SHC1P29353 KRT18P41-201ENST00000518924 1277 ntBASIC16.69■□□□□ 0.26
SHC1P29353 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.69■□□□□ 0.26
SHC1P29353 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.69■□□□□ 0.26
SHC1P29353 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.69■□□□□ 0.26
SHC1P29353 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.69■□□□□ 0.26
SHC1P29353 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.69■□□□□ 0.26
SHC1P29353 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.69■□□□□ 0.26
SHC1P29353 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.69■□□□□ 0.26
SHC1P29353 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.69■□□□□ 0.26
SHC1P29353 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.69■□□□□ 0.26
SHC1P29353 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHC1P29353 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHC1P29353 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SHC1P29353 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHC1P29353 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SHC1P29353 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHC1P29353 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.69■□□□□ 0.26
SHC1P29353 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SHC1P29353 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHC1P29353 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SHC1P29353 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHC1P29353 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHC1P29353 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHC1P29353 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHC1P29353 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHC1P29353 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHC1P29353 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHC1P29353 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.68■□□□□ 0.26
SHC1P29353 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHC1P29353 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SHC1P29353 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHC1P29353 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHC1P29353 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SHC1P29353 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.68■□□□□ 0.26
SHC1P29353 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHC1P29353 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SHC1P29353 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
SHC1P29353 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.68■□□□□ 0.26
SHC1P29353 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.68■□□□□ 0.26
SHC1P29353 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
SHC1P29353 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.68■□□□□ 0.26
SHC1P29353 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHC1P29353 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.68■□□□□ 0.26
SHC1P29353 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.68■□□□□ 0.26
SHC1P29353 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.68■□□□□ 0.26
SHC1P29353 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHC1P29353 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHC1P29353 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SHC1P29353 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHC1P29353 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.68■□□□□ 0.26
SHC1P29353 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.68■□□□□ 0.26
SHC1P29353 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHC1P29353 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHC1P29353 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
SHC1P29353 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHC1P29353 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHC1P29353 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
SHC1P29353 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SHC1P29353 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SHC1P29353 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHC1P29353 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SHC1P29353 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHC1P29353 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHC1P29353 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SHC1P29353 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHC1P29353 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHC1P29353 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.67■□□□□ 0.26
SHC1P29353 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHC1P29353 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHC1P29353 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHC1P29353 RNF152P1-201ENST00000397754 604 ntBASIC16.67■□□□□ 0.26
SHC1P29353 AP000523.1-201ENST00000398242 1049 ntBASIC16.67■□□□□ 0.26
SHC1P29353 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHC1P29353 SPDYE15P-201ENST00000424157 909 ntBASIC16.67■□□□□ 0.26
SHC1P29353 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.67■□□□□ 0.26
SHC1P29353 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHC1P29353 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHC1P29353 KRT18P38-201ENST00000449496 1282 ntBASIC16.67■□□□□ 0.26
SHC1P29353 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.67■□□□□ 0.26
SHC1P29353 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
SHC1P29353 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHC1P29353 AC104390.1-201ENST00000555663 520 ntBASIC16.67■□□□□ 0.26
SHC1P29353 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SHC1P29353 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
SHC1P29353 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHC1P29353 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHC1P29353 AC073592.3-201ENST00000625118 1834 ntBASIC16.67■□□□□ 0.26
SHC1P29353 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHC1P29353 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHC1P29353 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHC1P29353 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHC1P29353 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.67■□□□□ 0.26
SHC1P29353 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHC1P29353 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHC1P29353 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms