Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP24386 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP24386 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.02■□□□□ 0.32
CHMP24386 AC008622.2-201ENST00000617006 1229 ntBASIC17.02■□□□□ 0.32
CHMP24386 AC141257.4-201ENST00000634557 245 ntBASIC17.02■□□□□ 0.32
CHMP24386 AC136944.6-201ENST00000634818 245 ntBASIC17.02■□□□□ 0.32
CHMP24386 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP24386 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP24386 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.02■□□□□ 0.31
CHMP24386 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP24386 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.02■□□□□ 0.31
CHMP24386 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.02■□□□□ 0.31
CHMP24386 AC112777.1-201ENST00000540175 1423 ntBASIC17.02■□□□□ 0.31
CHMP24386 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CHMP24386 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP24386 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP24386 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.02■□□□□ 0.31
CHMP24386 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CHMP24386 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP24386 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP24386 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP24386 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP24386 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CHMP24386 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.01■□□□□ 0.31
CHMP24386 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CHMP24386 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
CHMP24386 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP24386 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.01■□□□□ 0.31
CHMP24386 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP24386 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.01■□□□□ 0.31
CHMP24386 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.01■□□□□ 0.31
CHMP24386 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CHMP24386 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP24386 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.01■□□□□ 0.31
CHMP24386 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP24386 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP24386 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP24386 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CHMP24386 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
CHMP24386 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.01■□□□□ 0.31
CHMP24386 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
CHMP24386 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.01■□□□□ 0.31
CHMP24386 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.01■□□□□ 0.31
CHMP24386 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP24386 AL031432.5-201ENST00000641059 760 ntBASIC17.01■□□□□ 0.31
CHMP24386 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP24386 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.01■□□□□ 0.31
CHMP24386 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.01■□□□□ 0.31
CHMP24386 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.01■□□□□ 0.31
CHMP24386 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP24386 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP24386 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.01■□□□□ 0.31
CHMP24386 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.01■□□□□ 0.31
CHMP24386 AC138028.4-201ENST00000564984 1845 ntBASIC17■□□□□ 0.31
CHMP24386 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17■□□□□ 0.31
CHMP24386 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP24386 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP24386 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP24386 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP24386 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHMP24386 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP24386 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP24386 AP000523.1-201ENST00000398242 1049 ntBASIC17■□□□□ 0.31
CHMP24386 KRT8P45-201ENST00000414328 1447 ntBASIC17■□□□□ 0.31
CHMP24386 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CHMP24386 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17■□□□□ 0.31
CHMP24386 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHMP24386 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17■□□□□ 0.31
CHMP24386 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHMP24386 WWOX-216ENST00000569818 525 ntBASIC17■□□□□ 0.31
CHMP24386 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17■□□□□ 0.31
CHMP24386 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17■□□□□ 0.31
CHMP24386 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17■□□□□ 0.31
CHMP24386 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17■□□□□ 0.31
CHMP24386 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17■□□□□ 0.31
CHMP24386 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHMP24386 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHMP24386 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17■□□□□ 0.31
CHMP24386 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHMP24386 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CHMP24386 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
CHMP24386 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
CHMP24386 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP24386 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP24386 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP24386 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP24386 PRORSD1P-202ENST00000563365 2154 ntBASIC16.99■□□□□ 0.31
CHMP24386 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP24386 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.99■□□□□ 0.31
CHMP24386 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP24386 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP24386 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP24386 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP24386 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP24386 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP24386 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CHMP24386 AL357033.4-201ENST00000617703 1807 ntBASIC16.99■□□□□ 0.31
CHMP24386 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CHMP24386 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CHMP24386 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms