Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 REXO1L10P-201ENST00000615707 1290 ntBASIC16.92■□□□□ 0.3
TNFRSF1BP20333 ITM2C-210ENST00000620962 501 ntBASIC16.92■□□□□ 0.3
TNFRSF1BP20333 REXO1L12P-201ENST00000622156 912 ntBASIC16.92■□□□□ 0.3
TNFRSF1BP20333 AC113410.3-201ENST00000623366 203 ntBASIC16.92■□□□□ 0.3
TNFRSF1BP20333 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 LINC01126-201ENST00000623515 1646 ntBASIC16.92■□□□□ 0.3
TNFRSF1BP20333 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 PCDHA12-202ENST00000613593 2588 ntBASIC16.91■□□□□ 0.3
TNFRSF1BP20333 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 AC006116.8-202ENST00000587620 1550 ntBASIC16.91■□□□□ 0.3
TNFRSF1BP20333 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 AL135905.2-201ENST00000584934 1404 ntBASIC16.91■□□□□ 0.3
TNFRSF1BP20333 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 AC098590.1-201ENST00000468126 897 ntBASIC16.91■□□□□ 0.3
TNFRSF1BP20333 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF1BP20333 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 AC108860.2-201ENST00000562760 2183 ntBASIC16.9■□□□□ 0.3
TNFRSF1BP20333 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 MIR149-201ENST00000384879 89 ntBASIC16.9■□□□□ 0.3
TNFRSF1BP20333 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms