Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PDE6GP18545 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC11.27□□□□□ -0.61
PDE6GP18545 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PDE6GP18545 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.61
PDE6GP18545 TPR-209ENST00000613151 2478 ntTSL 5 BASIC11.27□□□□□ -0.61
PDE6GP18545 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PDE6GP18545 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PDE6GP18545 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC11.26□□□□□ -0.61
PDE6GP18545 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
PDE6GP18545 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
PDE6GP18545 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PDE6GP18545 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PDE6GP18545 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PDE6GP18545 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC11.26□□□□□ -0.61
PDE6GP18545 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PDE6GP18545 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PDE6GP18545 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PDE6GP18545 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PDE6GP18545 KRT18P55-202ENST00000578578 1546 ntBASIC11.26□□□□□ -0.61
PDE6GP18545 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PDE6GP18545 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PDE6GP18545 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
PDE6GP18545 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC11.26□□□□□ -0.61
PDE6GP18545 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PDE6GP18545 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PDE6GP18545 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PDE6GP18545 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PDE6GP18545 MTURN-203ENST00000409688 843 ntTSL 2 BASIC11.26□□□□□ -0.61
PDE6GP18545 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC11.26□□□□□ -0.61
PDE6GP18545 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PDE6GP18545 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC11.26□□□□□ -0.61
PDE6GP18545 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC11.26□□□□□ -0.61
PDE6GP18545 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
PDE6GP18545 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PDE6GP18545 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC11.26□□□□□ -0.61
PDE6GP18545 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PDE6GP18545 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC11.26□□□□□ -0.61
PDE6GP18545 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PDE6GP18545 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
PDE6GP18545 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PDE6GP18545 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
PDE6GP18545 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC11.26□□□□□ -0.61
PDE6GP18545 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PDE6GP18545 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PDE6GP18545 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
PDE6GP18545 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PDE6GP18545 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
PDE6GP18545 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PDE6GP18545 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PDE6GP18545 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC11.26□□□□□ -0.61
PDE6GP18545 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PDE6GP18545 AL499627.1-201ENST00000569373 2188 ntBASIC11.26□□□□□ -0.61
PDE6GP18545 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC11.25□□□□□ -0.61
PDE6GP18545 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC11.25□□□□□ -0.61
PDE6GP18545 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC11.25□□□□□ -0.61
PDE6GP18545 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC11.25□□□□□ -0.61
PDE6GP18545 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 NFYC-AS1-201ENST00000606277 1687 ntBASIC11.25□□□□□ -0.61
PDE6GP18545 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC11.25□□□□□ -0.61
PDE6GP18545 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC11.25□□□□□ -0.61
PDE6GP18545 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 AC027682.1-201ENST00000562846 899 ntBASIC11.25□□□□□ -0.61
PDE6GP18545 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC11.25□□□□□ -0.61
PDE6GP18545 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
PDE6GP18545 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC11.25□□□□□ -0.61
PDE6GP18545 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 GAS2L1P1-201ENST00000420145 1480 ntBASIC11.25□□□□□ -0.61
PDE6GP18545 KATNBL1P6-202ENST00000562413 1466 ntBASIC11.25□□□□□ -0.61
PDE6GP18545 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PDE6GP18545 MTMR9LP-203ENST00000426597 1545 ntBASIC11.25□□□□□ -0.61
PDE6GP18545 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
PDE6GP18545 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
PDE6GP18545 RCC2P6-201ENST00000526625 1557 ntBASIC11.24□□□□□ -0.61
PDE6GP18545 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms