Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
CFTRP13569 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC30.98■■■□□ 2.55
CFTRP13569 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CFTRP13569 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC30.98■■■□□ 2.55
CFTRP13569 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CFTRP13569 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC30.98■■■□□ 2.55
CFTRP13569 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CFTRP13569 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CFTRP13569 CRYGEP-201ENST00000412192 528 ntBASIC30.97■■■□□ 2.55
CFTRP13569 VN2R19P-201ENST00000442399 1052 ntBASIC30.97■■■□□ 2.55
CFTRP13569 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC30.97■■■□□ 2.55
CFTRP13569 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC30.97■■■□□ 2.55
CFTRP13569 RIN3-211ENST00000557762 517 ntTSL 3 BASIC30.97■■■□□ 2.55
CFTRP13569 AC011467.4-201ENST00000594891 528 ntBASIC30.97■■■□□ 2.55
CFTRP13569 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC30.97■■■□□ 2.55
CFTRP13569 AC106028.4-201ENST00000614509 607 ntBASIC30.97■■■□□ 2.55
CFTRP13569 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC30.97■■■□□ 2.55
CFTRP13569 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CFTRP13569 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC30.97■■■□□ 2.55
CFTRP13569 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC30.97■■■□□ 2.55
CFTRP13569 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC30.97■■■□□ 2.55
CFTRP13569 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC30.97■■■□□ 2.55
CFTRP13569 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC30.97■■■□□ 2.55
CFTRP13569 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC30.97■■■□□ 2.55
CFTRP13569 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CFTRP13569 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC30.96■■■□□ 2.55
CFTRP13569 STOM-202ENST00000347359 870 ntTSL 2 BASIC30.96■■■□□ 2.55
CFTRP13569 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC30.96■■■□□ 2.55
CFTRP13569 PRSS29P-201ENST00000440800 595 ntBASIC30.96■■■□□ 2.55
CFTRP13569 BCRP1-201ENST00000444246 691 ntBASIC30.96■■■□□ 2.55
CFTRP13569 LHX6-205ENST00000464484 666 ntTSL 2 BASIC30.96■■■□□ 2.55
CFTRP13569 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC30.96■■■□□ 2.55
CFTRP13569 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC30.96■■■□□ 2.55
CFTRP13569 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC30.96■■■□□ 2.55
CFTRP13569 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CFTRP13569 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC30.96■■■□□ 2.55
CFTRP13569 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
CFTRP13569 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
CFTRP13569 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CFTRP13569 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CFTRP13569 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CFTRP13569 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC30.96■■■□□ 2.55
CFTRP13569 AL139400.1-201ENST00000366220 510 ntBASIC30.95■■■□□ 2.55
CFTRP13569 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC30.95■■■□□ 2.55
CFTRP13569 SYS1-203ENST00000414310 795 ntTSL 3 BASIC30.95■■■□□ 2.55
CFTRP13569 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC30.95■■■□□ 2.55
CFTRP13569 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
CFTRP13569 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC30.95■■■□□ 2.55
CFTRP13569 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC30.95■■■□□ 2.55
CFTRP13569 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.55
CFTRP13569 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC30.95■■■□□ 2.55
CFTRP13569 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
CFTRP13569 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC30.95■■■□□ 2.55
CFTRP13569 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC30.95■■■□□ 2.54
CFTRP13569 KRT8P47-201ENST00000604727 1398 ntBASIC30.95■■■□□ 2.54
CFTRP13569 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
CFTRP13569 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.54
CFTRP13569 CD82-202ENST00000342935 967 ntTSL 5 BASIC30.95■■■□□ 2.54
CFTRP13569 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
CFTRP13569 METTL26-205ENST00000397666 726 ntTSL 2 BASIC30.95■■■□□ 2.54
CFTRP13569 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
CFTRP13569 AP000344.2-201ENST00000512987 629 ntBASIC30.95■■■□□ 2.54
CFTRP13569 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC30.95■■■□□ 2.54
CFTRP13569 MIR4751-201ENST00000578027 74 ntBASIC30.95■■■□□ 2.54
CFTRP13569 AC093028.1-201ENST00000622998 982 ntBASIC30.95■■■□□ 2.54
CFTRP13569 AL161938.1-201ENST00000569833 2180 ntBASIC30.95■■■□□ 2.54
CFTRP13569 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC30.94■■■□□ 2.54
CFTRP13569 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CFTRP13569 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CFTRP13569 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CFTRP13569 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC30.94■■■□□ 2.54
CFTRP13569 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CFTRP13569 AL158211.5-201ENST00000623583 2518 ntBASIC30.94■■■□□ 2.54
CFTRP13569 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC30.94■■■□□ 2.54
CFTRP13569 AC148477.5-201ENST00000625164 1645 ntBASIC30.94■■■□□ 2.54
CFTRP13569 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC30.94■■■□□ 2.54
CFTRP13569 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC30.94■■■□□ 2.54
CFTRP13569 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC30.94■■■□□ 2.54
CFTRP13569 MAL2-202ENST00000531508 892 ntTSL 3 BASIC30.94■■■□□ 2.54
CFTRP13569 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC30.94■■■□□ 2.54
CFTRP13569 METTL23-205ENST00000588302 925 ntTSL 5 BASIC30.94■■■□□ 2.54
CFTRP13569 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC30.94■■■□□ 2.54
CFTRP13569 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
CFTRP13569 AC010507.1-201ENST00000633895 436 ntBASIC30.94■■■□□ 2.54
CFTRP13569 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC30.94■■■□□ 2.54
CFTRP13569 AL499627.1-201ENST00000569373 2188 ntBASIC30.94■■■□□ 2.54
CFTRP13569 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC30.93■■■□□ 2.54
CFTRP13569 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CFTRP13569 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
CFTRP13569 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC30.93■■■□□ 2.54
CFTRP13569 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CFTRP13569 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CFTRP13569 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CFTRP13569 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CFTRP13569 TSEN15P1-201ENST00000423257 515 ntBASIC30.93■■■□□ 2.54
CFTRP13569 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC30.93■■■□□ 2.54
CFTRP13569 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC30.93■■■□□ 2.54
CFTRP13569 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC30.93■■■□□ 2.54
CFTRP13569 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC30.93■■■□□ 2.54
CFTRP13569 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms