Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.93■□□□□ 0.94
BMP3P12645 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
BMP3P12645 AL121912.1-201ENST00000603683 238 ntBASIC20.93■□□□□ 0.94
BMP3P12645 AL138831.2-201ENST00000606564 490 ntBASIC20.93■□□□□ 0.94
BMP3P12645 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.93■□□□□ 0.94
BMP3P12645 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
BMP3P12645 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BMP3P12645 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
BMP3P12645 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BMP3P12645 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BMP3P12645 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BMP3P12645 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.92■□□□□ 0.94
BMP3P12645 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BMP3P12645 AC018445.3-201ENST00000624177 1945 ntBASIC20.92■□□□□ 0.94
BMP3P12645 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
BMP3P12645 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BMP3P12645 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BMP3P12645 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BMP3P12645 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
BMP3P12645 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BMP3P12645 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.92■□□□□ 0.94
BMP3P12645 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.92■□□□□ 0.94
BMP3P12645 RCN1P2-201ENST00000398357 915 ntBASIC20.92■□□□□ 0.94
BMP3P12645 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
BMP3P12645 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.92■□□□□ 0.94
BMP3P12645 AC112698.1-201ENST00000510299 916 ntBASIC20.92■□□□□ 0.94
BMP3P12645 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.92■□□□□ 0.94
BMP3P12645 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.92■□□□□ 0.94
BMP3P12645 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
BMP3P12645 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.92■□□□□ 0.94
BMP3P12645 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BMP3P12645 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
BMP3P12645 AC125634.1-201ENST00000438758 1403 ntBASIC20.92■□□□□ 0.94
BMP3P12645 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BMP3P12645 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.92■□□□□ 0.94
BMP3P12645 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
BMP3P12645 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BMP3P12645 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BMP3P12645 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
BMP3P12645 BX323043.1-201ENST00000641006 1765 ntBASIC20.92■□□□□ 0.94
BMP3P12645 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.92■□□□□ 0.94
BMP3P12645 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BMP3P12645 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BMP3P12645 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BMP3P12645 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BMP3P12645 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BMP3P12645 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BMP3P12645 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
BMP3P12645 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
BMP3P12645 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BMP3P12645 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.91■□□□□ 0.94
BMP3P12645 AF238378.1-201ENST00000526806 358 ntBASIC20.91■□□□□ 0.94
BMP3P12645 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
BMP3P12645 AC009533.2-201ENST00000543664 586 ntBASIC20.91■□□□□ 0.94
BMP3P12645 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BMP3P12645 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.91■□□□□ 0.94
BMP3P12645 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
BMP3P12645 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BMP3P12645 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.91■□□□□ 0.94
BMP3P12645 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.91■□□□□ 0.94
BMP3P12645 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.91■□□□□ 0.94
BMP3P12645 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.9■□□□□ 0.94
BMP3P12645 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BMP3P12645 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BMP3P12645 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.9■□□□□ 0.94
BMP3P12645 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
BMP3P12645 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
BMP3P12645 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BMP3P12645 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.9■□□□□ 0.94
BMP3P12645 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BMP3P12645 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BMP3P12645 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
BMP3P12645 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BMP3P12645 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
BMP3P12645 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BMP3P12645 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
BMP3P12645 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BMP3P12645 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.9■□□□□ 0.94
BMP3P12645 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BMP3P12645 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.9■□□□□ 0.94
BMP3P12645 AP002469.2-201ENST00000531724 424 ntBASIC20.9■□□□□ 0.94
BMP3P12645 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.9■□□□□ 0.94
BMP3P12645 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
BMP3P12645 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BMP3P12645 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
BMP3P12645 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BMP3P12645 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
BMP3P12645 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BMP3P12645 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.9■□□□□ 0.94
BMP3P12645 PHGDH-209ENST00000641074 1780 ntBASIC20.9■□□□□ 0.94
BMP3P12645 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
BMP3P12645 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
BMP3P12645 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.89■□□□□ 0.94
BMP3P12645 AC098818.2-201ENST00000564925 2320 ntBASIC20.89■□□□□ 0.94
BMP3P12645 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.89■□□□□ 0.94
BMP3P12645 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
BMP3P12645 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
BMP3P12645 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.89■□□□□ 0.94
BMP3P12645 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.89■□□□□ 0.94
BMP3P12645 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms