Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL11A1P12107 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL11A1P12107 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.57■□□□□ 0.88
COL11A1P12107 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.57■□□□□ 0.88
COL11A1P12107 AL356309.3-201ENST00000624132 1934 ntBASIC20.57■□□□□ 0.88
COL11A1P12107 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.57■□□□□ 0.88
COL11A1P12107 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.57■□□□□ 0.88
COL11A1P12107 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.57■□□□□ 0.88
COL11A1P12107 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL11A1P12107 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.57■□□□□ 0.88
COL11A1P12107 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL11A1P12107 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL11A1P12107 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.56■□□□□ 0.88
COL11A1P12107 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
COL11A1P12107 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A1P12107 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
COL11A1P12107 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
COL11A1P12107 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A1P12107 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.56■□□□□ 0.88
COL11A1P12107 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.56■□□□□ 0.88
COL11A1P12107 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A1P12107 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A1P12107 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
COL11A1P12107 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A1P12107 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
COL11A1P12107 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A1P12107 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.56■□□□□ 0.88
COL11A1P12107 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.56■□□□□ 0.88
COL11A1P12107 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.56■□□□□ 0.88
COL11A1P12107 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.56■□□□□ 0.88
COL11A1P12107 TERC-201ENST00000602385 541 ntBASIC20.56■□□□□ 0.88
COL11A1P12107 PHGDH-209ENST00000641074 1780 ntBASIC20.56■□□□□ 0.88
COL11A1P12107 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.56■□□□□ 0.88
COL11A1P12107 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.56■□□□□ 0.88
COL11A1P12107 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A1P12107 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
COL11A1P12107 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A1P12107 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.56■□□□□ 0.88
COL11A1P12107 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A1P12107 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A1P12107 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.56■□□□□ 0.88
COL11A1P12107 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 AC025062.2-201ENST00000605477 670 ntBASIC20.55■□□□□ 0.88
COL11A1P12107 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.55■□□□□ 0.88
COL11A1P12107 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
COL11A1P12107 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.55■□□□□ 0.88
COL11A1P12107 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.55■□□□□ 0.88
COL11A1P12107 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.55■□□□□ 0.88
COL11A1P12107 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.55■□□□□ 0.88
COL11A1P12107 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 AC092910.1-201ENST00000482027 1129 ntBASIC20.55■□□□□ 0.88
COL11A1P12107 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
COL11A1P12107 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.55■□□□□ 0.88
COL11A1P12107 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.55■□□□□ 0.88
COL11A1P12107 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.55■□□□□ 0.88
COL11A1P12107 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.55■□□□□ 0.88
COL11A1P12107 GPALPP1-207ENST00000611650 899 ntBASIC20.55■□□□□ 0.88
COL11A1P12107 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
COL11A1P12107 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 AC148477.5-201ENST00000625164 1645 ntBASIC20.54■□□□□ 0.88
COL11A1P12107 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL11A1P12107 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.54■□□□□ 0.88
COL11A1P12107 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL11A1P12107 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL11A1P12107 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.54■□□□□ 0.88
COL11A1P12107 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL11A1P12107 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.54■□□□□ 0.88
COL11A1P12107 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL11A1P12107 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL11A1P12107 AC092865.5-201ENST00000545435 363 ntBASIC20.54■□□□□ 0.88
COL11A1P12107 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.54■□□□□ 0.88
COL11A1P12107 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.54■□□□□ 0.88
COL11A1P12107 AC116407.3-201ENST00000623905 1129 ntBASIC20.54■□□□□ 0.88
COL11A1P12107 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL11A1P12107 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
COL11A1P12107 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
COL11A1P12107 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL11A1P12107 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL11A1P12107 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
COL11A1P12107 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.54■□□□□ 0.88
COL11A1P12107 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL11A1P12107 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL11A1P12107 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL11A1P12107 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
COL11A1P12107 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL11A1P12107 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.53■□□□□ 0.88
COL11A1P12107 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.53■□□□□ 0.88
COL11A1P12107 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms