Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL11A1P12107 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL11A1P12107 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.57■□□□□ 0.88
COL11A1P12107 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.57■□□□□ 0.88
COL11A1P12107 AL356309.3-201ENST00000624132 1934 ntBASIC20.57■□□□□ 0.88
COL11A1P12107 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.57■□□□□ 0.88
COL11A1P12107 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.57■□□□□ 0.88
COL11A1P12107 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.57■□□□□ 0.88
COL11A1P12107 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL11A1P12107 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.57■□□□□ 0.88
COL11A1P12107 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL11A1P12107 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL11A1P12107 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.56■□□□□ 0.88
COL11A1P12107 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
COL11A1P12107 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A1P12107 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
COL11A1P12107 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
COL11A1P12107 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A1P12107 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.56■□□□□ 0.88
COL11A1P12107 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.56■□□□□ 0.88
COL11A1P12107 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A1P12107 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A1P12107 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
COL11A1P12107 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A1P12107 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
COL11A1P12107 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A1P12107 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.56■□□□□ 0.88
COL11A1P12107 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.56■□□□□ 0.88
COL11A1P12107 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.56■□□□□ 0.88
COL11A1P12107 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.56■□□□□ 0.88
COL11A1P12107 TERC-201ENST00000602385 541 ntBASIC20.56■□□□□ 0.88
COL11A1P12107 PHGDH-209ENST00000641074 1780 ntBASIC20.56■□□□□ 0.88
COL11A1P12107 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.56■□□□□ 0.88
COL11A1P12107 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.56■□□□□ 0.88
COL11A1P12107 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A1P12107 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
COL11A1P12107 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A1P12107 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.56■□□□□ 0.88
COL11A1P12107 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A1P12107 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A1P12107 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.56■□□□□ 0.88
COL11A1P12107 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 AC025062.2-201ENST00000605477 670 ntBASIC20.55■□□□□ 0.88
COL11A1P12107 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.55■□□□□ 0.88
COL11A1P12107 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
COL11A1P12107 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.55■□□□□ 0.88
COL11A1P12107 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.55■□□□□ 0.88
COL11A1P12107 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.55■□□□□ 0.88
COL11A1P12107 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.55■□□□□ 0.88
COL11A1P12107 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 AC092910.1-201ENST00000482027 1129 ntBASIC20.55■□□□□ 0.88
COL11A1P12107 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
COL11A1P12107 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.55■□□□□ 0.88
COL11A1P12107 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.55■□□□□ 0.88
COL11A1P12107 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.55■□□□□ 0.88
COL11A1P12107 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.55■□□□□ 0.88
COL11A1P12107 GPALPP1-207ENST00000611650 899 ntBASIC20.55■□□□□ 0.88
COL11A1P12107 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
COL11A1P12107 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A1P12107 AC148477.5-201ENST00000625164 1645 ntBASIC20.54■□□□□ 0.88
COL11A1P12107 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL11A1P12107 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.54■□□□□ 0.88
COL11A1P12107 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL11A1P12107 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL11A1P12107 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.54■□□□□ 0.88
COL11A1P12107 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL11A1P12107 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.54■□□□□ 0.88
COL11A1P12107 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL11A1P12107 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL11A1P12107 AC092865.5-201ENST00000545435 363 ntBASIC20.54■□□□□ 0.88
COL11A1P12107 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.54■□□□□ 0.88
COL11A1P12107 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.54■□□□□ 0.88
COL11A1P12107 AC116407.3-201ENST00000623905 1129 ntBASIC20.54■□□□□ 0.88
COL11A1P12107 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL11A1P12107 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
COL11A1P12107 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
COL11A1P12107 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL11A1P12107 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL11A1P12107 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
COL11A1P12107 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.54■□□□□ 0.88
COL11A1P12107 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL11A1P12107 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL11A1P12107 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL11A1P12107 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
COL11A1P12107 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL11A1P12107 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.53■□□□□ 0.88
COL11A1P12107 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.53■□□□□ 0.88
COL11A1P12107 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms