Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.34■□□□□ 0.53
SRFP11831 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.34■□□□□ 0.53
SRFP11831 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRFP11831 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.34■□□□□ 0.53
SRFP11831 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRFP11831 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.34■□□□□ 0.53
SRFP11831 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SRFP11831 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.34■□□□□ 0.53
SRFP11831 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.34■□□□□ 0.53
SRFP11831 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.33■□□□□ 0.53
SRFP11831 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.33■□□□□ 0.53
SRFP11831 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.53
SRFP11831 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRFP11831 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SRFP11831 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SRFP11831 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.33■□□□□ 0.53
SRFP11831 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRFP11831 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.33■□□□□ 0.53
SRFP11831 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.33■□□□□ 0.53
SRFP11831 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SRFP11831 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRFP11831 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.33■□□□□ 0.52
SRFP11831 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRFP11831 KRT18P2-201ENST00000447938 1258 ntBASIC18.33■□□□□ 0.52
SRFP11831 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SRFP11831 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SRFP11831 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SRFP11831 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.33■□□□□ 0.52
SRFP11831 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
SRFP11831 MIR4469-201ENST00000583919 79 ntBASIC18.33■□□□□ 0.52
SRFP11831 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.33■□□□□ 0.52
SRFP11831 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.33■□□□□ 0.52
SRFP11831 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRFP11831 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRFP11831 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRFP11831 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRFP11831 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRFP11831 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.32■□□□□ 0.52
SRFP11831 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRFP11831 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRFP11831 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRFP11831 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SRFP11831 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRFP11831 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRFP11831 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRFP11831 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRFP11831 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SRFP11831 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.32■□□□□ 0.52
SRFP11831 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.32■□□□□ 0.52
SRFP11831 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.32■□□□□ 0.52
SRFP11831 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.32■□□□□ 0.52
SRFP11831 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SRFP11831 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.32■□□□□ 0.52
SRFP11831 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRFP11831 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRFP11831 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.32■□□□□ 0.52
SRFP11831 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SRFP11831 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.32■□□□□ 0.52
SRFP11831 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SRFP11831 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.32■□□□□ 0.52
SRFP11831 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.32■□□□□ 0.52
SRFP11831 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRFP11831 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.32■□□□□ 0.52
SRFP11831 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRFP11831 AL158211.5-201ENST00000623583 2518 ntBASIC18.31■□□□□ 0.52
SRFP11831 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SRFP11831 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRFP11831 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRFP11831 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRFP11831 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.31■□□□□ 0.52
SRFP11831 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SRFP11831 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.31■□□□□ 0.52
SRFP11831 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.31■□□□□ 0.52
SRFP11831 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.31■□□□□ 0.52
SRFP11831 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
SRFP11831 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRFP11831 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRFP11831 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRFP11831 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.31■□□□□ 0.52
SRFP11831 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRFP11831 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRFP11831 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRFP11831 SIGLEC16-201ENST00000599858 1437 ntBASIC18.31■□□□□ 0.52
SRFP11831 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRFP11831 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRFP11831 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRFP11831 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRFP11831 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SRFP11831 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRFP11831 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.3■□□□□ 0.52
SRFP11831 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRFP11831 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.3■□□□□ 0.52
SRFP11831 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.3■□□□□ 0.52
SRFP11831 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.3■□□□□ 0.52
SRFP11831 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SRFP11831 ALG1L5P-201ENST00000482043 771 ntBASIC18.3■□□□□ 0.52
SRFP11831 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.3■□□□□ 0.52
SRFP11831 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.3■□□□□ 0.52
SRFP11831 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRFP11831 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms