Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LAMP1P11279 AC012317.2-201ENST00000623305 2251 ntBASIC17.26■□□□□ 0.35
LAMP1P11279 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LAMP1P11279 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
LAMP1P11279 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMP1P11279 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMP1P11279 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LAMP1P11279 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMP1P11279 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.25■□□□□ 0.35
LAMP1P11279 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LAMP1P11279 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LAMP1P11279 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.25■□□□□ 0.35
LAMP1P11279 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMP1P11279 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LAMP1P11279 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.25■□□□□ 0.35
LAMP1P11279 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMP1P11279 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LAMP1P11279 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.25■□□□□ 0.35
LAMP1P11279 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMP1P11279 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMP1P11279 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LAMP1P11279 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMP1P11279 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMP1P11279 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMP1P11279 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMP1P11279 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMP1P11279 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LAMP1P11279 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
LAMP1P11279 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.25■□□□□ 0.35
LAMP1P11279 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.25■□□□□ 0.35
LAMP1P11279 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMP1P11279 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
LAMP1P11279 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LAMP1P11279 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.25■□□□□ 0.35
LAMP1P11279 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMP1P11279 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.25■□□□□ 0.35
LAMP1P11279 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LAMP1P11279 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LAMP1P11279 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMP1P11279 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LAMP1P11279 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LAMP1P11279 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LAMP1P11279 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.24■□□□□ 0.35
LAMP1P11279 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LAMP1P11279 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LAMP1P11279 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LAMP1P11279 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LAMP1P11279 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.24■□□□□ 0.35
LAMP1P11279 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LAMP1P11279 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.24■□□□□ 0.35
LAMP1P11279 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LAMP1P11279 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LAMP1P11279 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LAMP1P11279 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.24■□□□□ 0.35
LAMP1P11279 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LAMP1P11279 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LAMP1P11279 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
LAMP1P11279 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.24■□□□□ 0.35
LAMP1P11279 AC009947.2-201ENST00000444014 672 ntBASIC17.24■□□□□ 0.35
LAMP1P11279 SEC1P-202ENST00000473944 940 ntBASIC17.24■□□□□ 0.35
LAMP1P11279 AC128688.1-201ENST00000487626 519 ntBASIC17.24■□□□□ 0.35
LAMP1P11279 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.24■□□□□ 0.35
LAMP1P11279 NAPSB-206ENST00000562112 1266 ntBASIC17.24■□□□□ 0.35
LAMP1P11279 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
LAMP1P11279 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
LAMP1P11279 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.24■□□□□ 0.35
LAMP1P11279 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LAMP1P11279 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LAMP1P11279 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LAMP1P11279 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LAMP1P11279 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LAMP1P11279 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LAMP1P11279 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LAMP1P11279 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LAMP1P11279 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LAMP1P11279 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.24■□□□□ 0.35
LAMP1P11279 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LAMP1P11279 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LAMP1P11279 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LAMP1P11279 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LAMP1P11279 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LAMP1P11279 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LAMP1P11279 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.23■□□□□ 0.35
LAMP1P11279 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LAMP1P11279 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LAMP1P11279 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LAMP1P11279 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LAMP1P11279 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.23■□□□□ 0.35
LAMP1P11279 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LAMP1P11279 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LAMP1P11279 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LAMP1P11279 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LAMP1P11279 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LAMP1P11279 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LAMP1P11279 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LAMP1P11279 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.23■□□□□ 0.35
LAMP1P11279 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LAMP1P11279 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LAMP1P11279 AC024243.1-201ENST00000609234 778 ntBASIC17.23■□□□□ 0.35
LAMP1P11279 FAM87A-204ENST00000613235 858 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms