Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSDP07339 AP001094.4-201ENST00000579008 2176 ntBASIC15.13■□□□□ 0.01
CTSDP07339 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.13■□□□□ 0.01
CTSDP07339 LINC00602-201ENST00000629776 2065 ntBASIC15.13■□□□□ 0.01
CTSDP07339 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSDP07339 AL121761.2-201ENST00000598007 1648 ntBASIC15.13■□□□□ 0.01
CTSDP07339 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CTSDP07339 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.13■□□□□ 0.01
CTSDP07339 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
CTSDP07339 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSDP07339 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CTSDP07339 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.13■□□□□ 0.01
CTSDP07339 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CTSDP07339 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.12■□□□□ 0.01
CTSDP07339 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSDP07339 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSDP07339 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CTSDP07339 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CTSDP07339 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSDP07339 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSDP07339 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSDP07339 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
CTSDP07339 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSDP07339 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSDP07339 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CTSDP07339 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSDP07339 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSDP07339 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.12■□□□□ 0.01
CTSDP07339 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSDP07339 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSDP07339 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSDP07339 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CTSDP07339 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CTSDP07339 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSDP07339 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CTSDP07339 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC15.12■□□□□ 0.01
CTSDP07339 KLF13-207ENST00000560473 489 ntTSL 3 BASIC15.12■□□□□ 0.01
CTSDP07339 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.12■□□□□ 0.01
CTSDP07339 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.12■□□□□ 0.01
CTSDP07339 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CTSDP07339 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.12■□□□□ 0.01
CTSDP07339 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
CTSDP07339 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSDP07339 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.12■□□□□ 0.01
CTSDP07339 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.12■□□□□ 0.01
CTSDP07339 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CTSDP07339 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CTSDP07339 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSDP07339 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSDP07339 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.12■□□□□ 0.01
CTSDP07339 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CTSDP07339 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSDP07339 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSDP07339 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
CTSDP07339 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CTSDP07339 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSDP07339 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSDP07339 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CTSDP07339 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSDP07339 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CTSDP07339 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.11■□□□□ 0.01
CTSDP07339 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CTSDP07339 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CTSDP07339 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CTSDP07339 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSDP07339 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.11■□□□□ 0.01
CTSDP07339 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CTSDP07339 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSDP07339 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSDP07339 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CTSDP07339 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSDP07339 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSDP07339 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CTSDP07339 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSDP07339 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSDP07339 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSDP07339 NIFKP9-201ENST00000419265 221 ntBASIC15.11■□□□□ 0.01
CTSDP07339 UNC93B5-201ENST00000530315 699 ntBASIC15.11■□□□□ 0.01
CTSDP07339 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
CTSDP07339 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSDP07339 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSDP07339 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
CTSDP07339 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSDP07339 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSDP07339 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSDP07339 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CTSDP07339 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.11■□□□□ 0.01
CTSDP07339 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSDP07339 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CTSDP07339 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSDP07339 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSDP07339 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.11■□□□□ 0.01
CTSDP07339 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CTSDP07339 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSDP07339 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.1■□□□□ 0.01
CTSDP07339 SDHAP2-201ENST00000455183 2001 ntBASIC15.1■□□□□ 0.01
CTSDP07339 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CTSDP07339 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CTSDP07339 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CTSDP07339 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms