Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.12■□□□□ 0.65
ERBB2P04626 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERBB2P04626 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERBB2P04626 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ERBB2P04626 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.12■□□□□ 0.65
ERBB2P04626 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.12■□□□□ 0.65
ERBB2P04626 AL049597.2-201ENST00000565575 961 ntBASIC19.12■□□□□ 0.65
ERBB2P04626 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
ERBB2P04626 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ERBB2P04626 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.12■□□□□ 0.65
ERBB2P04626 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ERBB2P04626 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERBB2P04626 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERBB2P04626 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ERBB2P04626 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ERBB2P04626 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.11■□□□□ 0.65
ERBB2P04626 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ERBB2P04626 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ERBB2P04626 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERBB2P04626 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERBB2P04626 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERBB2P04626 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERBB2P04626 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ERBB2P04626 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.11■□□□□ 0.65
ERBB2P04626 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERBB2P04626 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
ERBB2P04626 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.11■□□□□ 0.65
ERBB2P04626 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERBB2P04626 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERBB2P04626 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ERBB2P04626 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERBB2P04626 MIR662-201ENST00000384847 95 ntBASIC19.11■□□□□ 0.65
ERBB2P04626 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.11■□□□□ 0.65
ERBB2P04626 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.11■□□□□ 0.65
ERBB2P04626 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.11■□□□□ 0.65
ERBB2P04626 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ERBB2P04626 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.11■□□□□ 0.65
ERBB2P04626 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.11■□□□□ 0.65
ERBB2P04626 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ERBB2P04626 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ERBB2P04626 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERBB2P04626 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ERBB2P04626 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ERBB2P04626 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ERBB2P04626 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERBB2P04626 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.11■□□□□ 0.65
ERBB2P04626 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ERBB2P04626 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.11■□□□□ 0.65
ERBB2P04626 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.11■□□□□ 0.65
ERBB2P04626 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERBB2P04626 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ERBB2P04626 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERBB2P04626 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERBB2P04626 LINC00602-201ENST00000629776 2065 ntBASIC19.1■□□□□ 0.65
ERBB2P04626 KRT89P-201ENST00000620027 1478 ntBASIC19.1■□□□□ 0.65
ERBB2P04626 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.1■□□□□ 0.65
ERBB2P04626 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.1■□□□□ 0.65
ERBB2P04626 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.1■□□□□ 0.65
ERBB2P04626 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERBB2P04626 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.1■□□□□ 0.65
ERBB2P04626 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ERBB2P04626 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ERBB2P04626 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.1■□□□□ 0.65
ERBB2P04626 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.1■□□□□ 0.65
ERBB2P04626 LINC01238-205ENST00000567549 1107 ntBASIC19.1■□□□□ 0.65
ERBB2P04626 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.1■□□□□ 0.65
ERBB2P04626 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.1■□□□□ 0.65
ERBB2P04626 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ERBB2P04626 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERBB2P04626 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERBB2P04626 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.1■□□□□ 0.65
ERBB2P04626 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERBB2P04626 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ERBB2P04626 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERBB2P04626 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ERBB2P04626 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ERBB2P04626 FLJ13224-201ENST00000313737 1514 ntBASIC19.1■□□□□ 0.65
ERBB2P04626 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.09■□□□□ 0.65
ERBB2P04626 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERBB2P04626 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.09■□□□□ 0.65
ERBB2P04626 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
ERBB2P04626 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
ERBB2P04626 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERBB2P04626 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERBB2P04626 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
ERBB2P04626 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ERBB2P04626 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERBB2P04626 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ERBB2P04626 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERBB2P04626 KRT18P48-201ENST00000434763 852 ntBASIC19.09■□□□□ 0.65
ERBB2P04626 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.09■□□□□ 0.65
ERBB2P04626 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.09■□□□□ 0.65
ERBB2P04626 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.09■□□□□ 0.65
ERBB2P04626 NTF6B-201ENST00000591913 560 ntBASIC19.09■□□□□ 0.65
ERBB2P04626 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
ERBB2P04626 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.09■□□□□ 0.65
ERBB2P04626 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
ERBB2P04626 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
ERBB2P04626 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.09■□□□□ 0.65
ERBB2P04626 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms