Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04436 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
P04436 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04436 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.6■□□□□ 0.25
P04436 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04436 AC104819.1-201ENST00000504587 486 ntBASIC16.6■□□□□ 0.25
P04436 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
P04436 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.6■□□□□ 0.25
P04436 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04436 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04436 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04436 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.6■□□□□ 0.25
P04436 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.6■□□□□ 0.25
P04436 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04436 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
P04436 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
P04436 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.6■□□□□ 0.25
P04436 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04436 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04436 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04436 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04436 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
P04436 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
P04436 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04436 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
P04436 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
P04436 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04436 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
P04436 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04436 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04436 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04436 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04436 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.59■□□□□ 0.25
P04436 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
P04436 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.59■□□□□ 0.25
P04436 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
P04436 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
P04436 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04436 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04436 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.59■□□□□ 0.25
P04436 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
P04436 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
P04436 KRT126P-201ENST00000549467 1181 ntBASIC16.59■□□□□ 0.25
P04436 AC012615.1-201ENST00000565797 1299 ntBASIC16.59■□□□□ 0.25
P04436 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04436 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.59■□□□□ 0.25
P04436 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.59■□□□□ 0.25
P04436 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04436 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.59■□□□□ 0.25
P04436 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
P04436 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.25
P04436 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
P04436 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04436 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04436 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04436 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
P04436 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
P04436 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.59■□□□□ 0.25
P04436 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04436 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04436 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
P04436 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04436 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04436 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.59■□□□□ 0.25
P04436 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04436 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.59■□□□□ 0.25
P04436 AC073592.3-201ENST00000625118 1834 ntBASIC16.59■□□□□ 0.25
P04436 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04436 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04436 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.58■□□□□ 0.25
P04436 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.58■□□□□ 0.25
P04436 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
P04436 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
P04436 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
P04436 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.58■□□□□ 0.25
P04436 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
P04436 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.58■□□□□ 0.24
P04436 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
P04436 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.58■□□□□ 0.24
P04436 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
P04436 RN7SL606P-201ENST00000472779 293 ntBASIC16.58■□□□□ 0.24
P04436 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.58■□□□□ 0.24
P04436 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.58■□□□□ 0.24
P04436 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.58■□□□□ 0.24
P04436 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.58■□□□□ 0.24
P04436 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.58■□□□□ 0.24
P04436 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
P04436 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.58■□□□□ 0.24
P04436 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
P04436 LINC00602-201ENST00000629776 2065 ntBASIC16.58■□□□□ 0.24
P04436 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.58■□□□□ 0.24
P04436 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
P04436 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
P04436 AC098818.2-201ENST00000564925 2320 ntBASIC16.58■□□□□ 0.24
P04436 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
P04436 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04436 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04436 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04436 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
P04436 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms