Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TIMP1P01033 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TIMP1P01033 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TIMP1P01033 CRYGEP-201ENST00000412192 528 ntBASIC19.58■□□□□ 0.72
TIMP1P01033 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.58■□□□□ 0.72
TIMP1P01033 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.58■□□□□ 0.72
TIMP1P01033 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.58■□□□□ 0.72
TIMP1P01033 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.58■□□□□ 0.72
TIMP1P01033 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
TIMP1P01033 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TIMP1P01033 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TIMP1P01033 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TIMP1P01033 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.58■□□□□ 0.72
TIMP1P01033 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
TIMP1P01033 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
TIMP1P01033 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.58■□□□□ 0.72
TIMP1P01033 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TIMP1P01033 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TIMP1P01033 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TIMP1P01033 AL032819.2-201ENST00000624543 2162 ntBASIC19.57■□□□□ 0.72
TIMP1P01033 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP1P01033 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.57■□□□□ 0.72
TIMP1P01033 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP1P01033 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP1P01033 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
TIMP1P01033 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TIMP1P01033 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.57■□□□□ 0.72
TIMP1P01033 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP1P01033 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP1P01033 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP1P01033 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP1P01033 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.57■□□□□ 0.72
TIMP1P01033 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP1P01033 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.57■□□□□ 0.72
TIMP1P01033 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP1P01033 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.57■□□□□ 0.72
TIMP1P01033 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.57■□□□□ 0.72
TIMP1P01033 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.57■□□□□ 0.72
TIMP1P01033 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.57■□□□□ 0.72
TIMP1P01033 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.57■□□□□ 0.72
TIMP1P01033 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TIMP1P01033 AD001527.2-201ENST00000622994 785 ntBASIC19.57■□□□□ 0.72
TIMP1P01033 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
TIMP1P01033 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP1P01033 SIGLEC16-201ENST00000599858 1437 ntBASIC19.57■□□□□ 0.72
TIMP1P01033 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP1P01033 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP1P01033 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP1P01033 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.57■□□□□ 0.72
TIMP1P01033 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TIMP1P01033 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.56■□□□□ 0.72
TIMP1P01033 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TIMP1P01033 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TIMP1P01033 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TIMP1P01033 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TIMP1P01033 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TIMP1P01033 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
TIMP1P01033 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.56■□□□□ 0.72
TIMP1P01033 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.56■□□□□ 0.72
TIMP1P01033 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TIMP1P01033 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TIMP1P01033 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
TIMP1P01033 MKNK2P1-201ENST00000437526 628 ntBASIC19.56■□□□□ 0.72
TIMP1P01033 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TIMP1P01033 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.56■□□□□ 0.72
TIMP1P01033 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.56■□□□□ 0.72
TIMP1P01033 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.56■□□□□ 0.72
TIMP1P01033 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.56■□□□□ 0.72
TIMP1P01033 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.56■□□□□ 0.72
TIMP1P01033 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.56■□□□□ 0.72
TIMP1P01033 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
TIMP1P01033 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.56■□□□□ 0.72
TIMP1P01033 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TIMP1P01033 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
TIMP1P01033 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.56■□□□□ 0.72
TIMP1P01033 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TIMP1P01033 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TIMP1P01033 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.56■□□□□ 0.72
TIMP1P01033 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
TIMP1P01033 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.56■□□□□ 0.72
TIMP1P01033 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.56■□□□□ 0.72
TIMP1P01033 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TIMP1P01033 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.56■□□□□ 0.72
TIMP1P01033 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.55■□□□□ 0.72
TIMP1P01033 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TIMP1P01033 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TIMP1P01033 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TIMP1P01033 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TIMP1P01033 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TIMP1P01033 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TIMP1P01033 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TIMP1P01033 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TIMP1P01033 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TIMP1P01033 MIR770-201ENST00000390219 98 ntBASIC19.55■□□□□ 0.72
TIMP1P01033 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TIMP1P01033 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.55■□□□□ 0.72
TIMP1P01033 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TIMP1P01033 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TIMP1P01033 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.55■□□□□ 0.72
TIMP1P01033 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms