Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.39■□□□□ 0.85
GGPS1O95749 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.39■□□□□ 0.85
GGPS1O95749 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
GGPS1O95749 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GGPS1O95749 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GGPS1O95749 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.38■□□□□ 0.85
GGPS1O95749 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
GGPS1O95749 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GGPS1O95749 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.38■□□□□ 0.85
GGPS1O95749 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.38■□□□□ 0.85
GGPS1O95749 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.38■□□□□ 0.85
GGPS1O95749 AC096582.2-201ENST00000510860 516 ntBASIC20.38■□□□□ 0.85
GGPS1O95749 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GGPS1O95749 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
GGPS1O95749 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.38■□□□□ 0.85
GGPS1O95749 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
GGPS1O95749 AC005336.2-201ENST00000593183 939 ntBASIC20.38■□□□□ 0.85
GGPS1O95749 AL121912.1-201ENST00000603683 238 ntBASIC20.38■□□□□ 0.85
GGPS1O95749 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
GGPS1O95749 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GGPS1O95749 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.38■□□□□ 0.85
GGPS1O95749 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GGPS1O95749 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GGPS1O95749 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GGPS1O95749 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GGPS1O95749 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GGPS1O95749 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.37■□□□□ 0.85
GGPS1O95749 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
GGPS1O95749 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GGPS1O95749 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GGPS1O95749 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GGPS1O95749 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GGPS1O95749 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GGPS1O95749 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.37■□□□□ 0.85
GGPS1O95749 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.37■□□□□ 0.85
GGPS1O95749 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.37■□□□□ 0.85
GGPS1O95749 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GGPS1O95749 REXO1L6P-202ENST00000619970 1078 ntBASIC20.37■□□□□ 0.85
GGPS1O95749 AC009154.2-201ENST00000621177 724 ntBASIC20.37■□□□□ 0.85
GGPS1O95749 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.37■□□□□ 0.85
GGPS1O95749 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.37■□□□□ 0.85
GGPS1O95749 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GGPS1O95749 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.37■□□□□ 0.85
GGPS1O95749 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
GGPS1O95749 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.37■□□□□ 0.85
GGPS1O95749 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.37■□□□□ 0.85
GGPS1O95749 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
GGPS1O95749 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GGPS1O95749 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GGPS1O95749 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
GGPS1O95749 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
GGPS1O95749 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.36■□□□□ 0.85
GGPS1O95749 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.36■□□□□ 0.85
GGPS1O95749 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GGPS1O95749 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.36■□□□□ 0.85
GGPS1O95749 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GGPS1O95749 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GGPS1O95749 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.36■□□□□ 0.85
GGPS1O95749 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
GGPS1O95749 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
GGPS1O95749 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
GGPS1O95749 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GGPS1O95749 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GGPS1O95749 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GGPS1O95749 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GGPS1O95749 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
GGPS1O95749 SAPCD2P3-201ENST00000455031 850 ntBASIC20.36■□□□□ 0.85
GGPS1O95749 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.36■□□□□ 0.85
GGPS1O95749 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.36■□□□□ 0.85
GGPS1O95749 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.36■□□□□ 0.85
GGPS1O95749 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GGPS1O95749 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
GGPS1O95749 AP002469.2-201ENST00000531724 424 ntBASIC20.36■□□□□ 0.85
GGPS1O95749 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
GGPS1O95749 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GGPS1O95749 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GGPS1O95749 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GGPS1O95749 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
GGPS1O95749 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GGPS1O95749 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
GGPS1O95749 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.35■□□□□ 0.85
GGPS1O95749 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.35■□□□□ 0.85
GGPS1O95749 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GGPS1O95749 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GGPS1O95749 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
GGPS1O95749 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GGPS1O95749 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
GGPS1O95749 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GGPS1O95749 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
GGPS1O95749 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.35■□□□□ 0.85
GGPS1O95749 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GGPS1O95749 MTCL1P1-201ENST00000446207 792 ntBASIC20.35■□□□□ 0.85
GGPS1O95749 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.35■□□□□ 0.85
GGPS1O95749 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.35■□□□□ 0.85
GGPS1O95749 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.35■□□□□ 0.85
GGPS1O95749 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.35■□□□□ 0.85
GGPS1O95749 MIR5100-201ENST00000579544 119 ntBASIC20.35■□□□□ 0.85
GGPS1O95749 AL591684.3-201ENST00000605187 298 ntBASIC20.35■□□□□ 0.85
GGPS1O95749 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GGPS1O95749 AC114341.1-201ENST00000618070 349 ntBASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms