Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLN5O75503 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CLN5O75503 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLN5O75503 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLN5O75503 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLN5O75503 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.87□□□□□ -0.03
CLN5O75503 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLN5O75503 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CLN5O75503 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CLN5O75503 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.87□□□□□ -0.03
CLN5O75503 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLN5O75503 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CLN5O75503 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CLN5O75503 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CLN5O75503 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CLN5O75503 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLN5O75503 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
CLN5O75503 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.87□□□□□ -0.03
CLN5O75503 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.87□□□□□ -0.03
CLN5O75503 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CLN5O75503 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CLN5O75503 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLN5O75503 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLN5O75503 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLN5O75503 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLN5O75503 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.87□□□□□ -0.03
CLN5O75503 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLN5O75503 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CLN5O75503 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.87□□□□□ -0.03
CLN5O75503 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CLN5O75503 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.87□□□□□ -0.03
CLN5O75503 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLN5O75503 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.87□□□□□ -0.03
CLN5O75503 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLN5O75503 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.87□□□□□ -0.03
CLN5O75503 MTDHP1-201ENST00000605323 784 ntBASIC14.87□□□□□ -0.03
CLN5O75503 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
CLN5O75503 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLN5O75503 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLN5O75503 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLN5O75503 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CLN5O75503 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLN5O75503 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CLN5O75503 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.87□□□□□ -0.03
CLN5O75503 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CLN5O75503 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLN5O75503 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLN5O75503 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLN5O75503 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLN5O75503 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLN5O75503 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLN5O75503 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLN5O75503 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CLN5O75503 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN5O75503 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLN5O75503 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.86□□□□□ -0.03
CLN5O75503 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CLN5O75503 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLN5O75503 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.86□□□□□ -0.03
CLN5O75503 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLN5O75503 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLN5O75503 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CLN5O75503 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN5O75503 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN5O75503 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN5O75503 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
CLN5O75503 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CLN5O75503 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN5O75503 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLN5O75503 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN5O75503 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.86□□□□□ -0.03
CLN5O75503 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.86□□□□□ -0.03
CLN5O75503 AC026366.1-201ENST00000488803 879 ntBASIC14.86□□□□□ -0.03
CLN5O75503 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.86□□□□□ -0.03
CLN5O75503 RNA5SP413-201ENST00000516373 109 ntBASIC14.86□□□□□ -0.03
CLN5O75503 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.86□□□□□ -0.03
CLN5O75503 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.86□□□□□ -0.03
CLN5O75503 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.86□□□□□ -0.03
CLN5O75503 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.86□□□□□ -0.03
CLN5O75503 AC069544.1-201ENST00000609399 999 ntBASIC14.86□□□□□ -0.03
CLN5O75503 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.86□□□□□ -0.03
CLN5O75503 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
CLN5O75503 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN5O75503 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC14.86□□□□□ -0.03
CLN5O75503 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN5O75503 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.86□□□□□ -0.03
CLN5O75503 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.86□□□□□ -0.03
CLN5O75503 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN5O75503 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC14.86□□□□□ -0.03
CLN5O75503 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN5O75503 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN5O75503 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN5O75503 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN5O75503 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CLN5O75503 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN5O75503 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN5O75503 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLN5O75503 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN5O75503 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN5O75503 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms