Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRPF40AO75400 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PRPF40AO75400 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRPF40AO75400 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRPF40AO75400 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC21.19■□□□□ 0.98
PRPF40AO75400 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.18■□□□□ 0.98
PRPF40AO75400 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF40AO75400 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PRPF40AO75400 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
PRPF40AO75400 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF40AO75400 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF40AO75400 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF40AO75400 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF40AO75400 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF40AO75400 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF40AO75400 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF40AO75400 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF40AO75400 AC008550.1-201ENST00000511500 884 ntBASIC21.18■□□□□ 0.98
PRPF40AO75400 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.18■□□□□ 0.98
PRPF40AO75400 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.18■□□□□ 0.98
PRPF40AO75400 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF40AO75400 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.18■□□□□ 0.98
PRPF40AO75400 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.18■□□□□ 0.98
PRPF40AO75400 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.18■□□□□ 0.98
PRPF40AO75400 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF40AO75400 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF40AO75400 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF40AO75400 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.18■□□□□ 0.98
PRPF40AO75400 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF40AO75400 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF40AO75400 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF40AO75400 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF40AO75400 TNRC18P3-201ENST00000441896 2691 ntBASIC21.18■□□□□ 0.98
PRPF40AO75400 AL109659.2-201ENST00000606809 1674 ntBASIC21.18■□□□□ 0.98
PRPF40AO75400 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PRPF40AO75400 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF40AO75400 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.18■□□□□ 0.98
PRPF40AO75400 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PRPF40AO75400 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PRPF40AO75400 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.17■□□□□ 0.98
PRPF40AO75400 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF40AO75400 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF40AO75400 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF40AO75400 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF40AO75400 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF40AO75400 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF40AO75400 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF40AO75400 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.17■□□□□ 0.98
PRPF40AO75400 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF40AO75400 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF40AO75400 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
PRPF40AO75400 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.17■□□□□ 0.98
PRPF40AO75400 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.17■□□□□ 0.98
PRPF40AO75400 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.17■□□□□ 0.98
PRPF40AO75400 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.17■□□□□ 0.98
PRPF40AO75400 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
PRPF40AO75400 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF40AO75400 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF40AO75400 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF40AO75400 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF40AO75400 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF40AO75400 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.17■□□□□ 0.98
PRPF40AO75400 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF40AO75400 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
PRPF40AO75400 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
PRPF40AO75400 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF40AO75400 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF40AO75400 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
PRPF40AO75400 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF40AO75400 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF40AO75400 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC21.16■□□□□ 0.98
PRPF40AO75400 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
PRPF40AO75400 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF40AO75400 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.16■□□□□ 0.98
PRPF40AO75400 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
PRPF40AO75400 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PRPF40AO75400 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.16■□□□□ 0.98
PRPF40AO75400 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PRPF40AO75400 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.16■□□□□ 0.98
PRPF40AO75400 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF40AO75400 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.16■□□□□ 0.98
PRPF40AO75400 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF40AO75400 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF40AO75400 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
PRPF40AO75400 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.16■□□□□ 0.98
PRPF40AO75400 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.16■□□□□ 0.98
PRPF40AO75400 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.16■□□□□ 0.98
PRPF40AO75400 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF40AO75400 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF40AO75400 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PRPF40AO75400 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF40AO75400 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF40AO75400 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF40AO75400 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF40AO75400 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PRPF40AO75400 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRPF40AO75400 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRPF40AO75400 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
PRPF40AO75400 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRPF40AO75400 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms