Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.4■□□□□ 0.22
PTP4A3O75365 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTP4A3O75365 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTP4A3O75365 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTP4A3O75365 INGX-201ENST00000359239 846 ntBASIC16.4■□□□□ 0.22
PTP4A3O75365 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.4■□□□□ 0.22
PTP4A3O75365 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.4■□□□□ 0.22
PTP4A3O75365 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.4■□□□□ 0.22
PTP4A3O75365 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTP4A3O75365 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.4■□□□□ 0.22
PTP4A3O75365 DUTP2-201ENST00000519164 463 ntBASIC16.4■□□□□ 0.22
PTP4A3O75365 EGLN1P1-201ENST00000531623 762 ntBASIC16.4■□□□□ 0.22
PTP4A3O75365 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.4■□□□□ 0.22
PTP4A3O75365 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.4■□□□□ 0.22
PTP4A3O75365 AC010240.3-201ENST00000607688 395 ntBASIC16.4■□□□□ 0.22
PTP4A3O75365 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.4■□□□□ 0.22
PTP4A3O75365 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTP4A3O75365 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTP4A3O75365 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTP4A3O75365 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.4■□□□□ 0.22
PTP4A3O75365 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.4■□□□□ 0.22
PTP4A3O75365 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTP4A3O75365 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTP4A3O75365 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.4■□□□□ 0.22
PTP4A3O75365 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.4■□□□□ 0.22
PTP4A3O75365 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTP4A3O75365 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PTP4A3O75365 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTP4A3O75365 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTP4A3O75365 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTP4A3O75365 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTP4A3O75365 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTP4A3O75365 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PTP4A3O75365 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTP4A3O75365 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTP4A3O75365 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.39■□□□□ 0.21
PTP4A3O75365 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PTP4A3O75365 AC012313.1-201ENST00000593393 3059 ntBASIC16.39■□□□□ 0.21
PTP4A3O75365 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PTP4A3O75365 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTP4A3O75365 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTP4A3O75365 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTP4A3O75365 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.39■□□□□ 0.21
PTP4A3O75365 AL355075.4-201ENST00000554988 638 ntBASIC16.39■□□□□ 0.21
PTP4A3O75365 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTP4A3O75365 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTP4A3O75365 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.39■□□□□ 0.21
PTP4A3O75365 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.39■□□□□ 0.21
PTP4A3O75365 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.39■□□□□ 0.21
PTP4A3O75365 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTP4A3O75365 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTP4A3O75365 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTP4A3O75365 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTP4A3O75365 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.39■□□□□ 0.21
PTP4A3O75365 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PTP4A3O75365 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTP4A3O75365 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTP4A3O75365 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PTP4A3O75365 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.39■□□□□ 0.21
PTP4A3O75365 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTP4A3O75365 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTP4A3O75365 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTP4A3O75365 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PTP4A3O75365 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PTP4A3O75365 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PTP4A3O75365 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTP4A3O75365 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTP4A3O75365 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTP4A3O75365 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTP4A3O75365 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTP4A3O75365 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PTP4A3O75365 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.38■□□□□ 0.21
PTP4A3O75365 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
PTP4A3O75365 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.38■□□□□ 0.21
PTP4A3O75365 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
PTP4A3O75365 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.38■□□□□ 0.21
PTP4A3O75365 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.38■□□□□ 0.21
PTP4A3O75365 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTP4A3O75365 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.38■□□□□ 0.21
PTP4A3O75365 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.38■□□□□ 0.21
PTP4A3O75365 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTP4A3O75365 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.38■□□□□ 0.21
PTP4A3O75365 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTP4A3O75365 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.38■□□□□ 0.21
PTP4A3O75365 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PTP4A3O75365 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTP4A3O75365 KRT17P2-201ENST00000300992 1314 ntBASIC16.38■□□□□ 0.21
PTP4A3O75365 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTP4A3O75365 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTP4A3O75365 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
PTP4A3O75365 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.37■□□□□ 0.21
PTP4A3O75365 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PTP4A3O75365 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.37■□□□□ 0.21
PTP4A3O75365 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTP4A3O75365 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.37■□□□□ 0.21
PTP4A3O75365 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.37■□□□□ 0.21
PTP4A3O75365 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTP4A3O75365 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.37■□□□□ 0.21
PTP4A3O75365 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PTP4A3O75365 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms