Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZIC3O60481 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ZIC3O60481 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ZIC3O60481 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ZIC3O60481 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZIC3O60481 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZIC3O60481 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZIC3O60481 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZIC3O60481 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
ZIC3O60481 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZIC3O60481 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ZIC3O60481 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
ZIC3O60481 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ZIC3O60481 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.34■□□□□ 0.21
ZIC3O60481 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
ZIC3O60481 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ZIC3O60481 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
ZIC3O60481 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ZIC3O60481 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.33■□□□□ 0.21
ZIC3O60481 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
ZIC3O60481 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZIC3O60481 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZIC3O60481 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
ZIC3O60481 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZIC3O60481 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.33■□□□□ 0.2
ZIC3O60481 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZIC3O60481 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.33■□□□□ 0.2
ZIC3O60481 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
ZIC3O60481 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.33■□□□□ 0.2
ZIC3O60481 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ZIC3O60481 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.33■□□□□ 0.2
ZIC3O60481 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.33■□□□□ 0.2
ZIC3O60481 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZIC3O60481 AL353801.3-201ENST00000609898 542 ntBASIC16.33■□□□□ 0.2
ZIC3O60481 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.33■□□□□ 0.2
ZIC3O60481 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZIC3O60481 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.33■□□□□ 0.2
ZIC3O60481 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZIC3O60481 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
ZIC3O60481 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
ZIC3O60481 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.33■□□□□ 0.2
ZIC3O60481 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZIC3O60481 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZIC3O60481 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZIC3O60481 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZIC3O60481 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZIC3O60481 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZIC3O60481 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
ZIC3O60481 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.33■□□□□ 0.2
ZIC3O60481 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZIC3O60481 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZIC3O60481 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ZIC3O60481 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.33■□□□□ 0.2
ZIC3O60481 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZIC3O60481 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZIC3O60481 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZIC3O60481 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZIC3O60481 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZIC3O60481 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZIC3O60481 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZIC3O60481 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.32■□□□□ 0.2
ZIC3O60481 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZIC3O60481 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZIC3O60481 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.32■□□□□ 0.2
ZIC3O60481 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZIC3O60481 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZIC3O60481 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.32■□□□□ 0.2
ZIC3O60481 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZIC3O60481 MTCL1P1-201ENST00000446207 792 ntBASIC16.32■□□□□ 0.2
ZIC3O60481 LINC00265-3P-201ENST00000447588 903 ntBASIC16.32■□□□□ 0.2
ZIC3O60481 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.32■□□□□ 0.2
ZIC3O60481 TOB2P1-201ENST00000469761 992 ntBASIC16.32■□□□□ 0.2
ZIC3O60481 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.32■□□□□ 0.2
ZIC3O60481 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
ZIC3O60481 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZIC3O60481 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZIC3O60481 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
ZIC3O60481 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.32■□□□□ 0.2
ZIC3O60481 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZIC3O60481 AC011840.4-201ENST00000578471 627 ntBASIC16.32■□□□□ 0.2
ZIC3O60481 AC233702.3-201ENST00000578656 1387 ntBASIC16.32■□□□□ 0.2
ZIC3O60481 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ZIC3O60481 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.32■□□□□ 0.2
ZIC3O60481 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZIC3O60481 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZIC3O60481 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.32■□□□□ 0.2
ZIC3O60481 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.32■□□□□ 0.2
ZIC3O60481 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZIC3O60481 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZIC3O60481 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ZIC3O60481 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC3O60481 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.31■□□□□ 0.2
ZIC3O60481 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC3O60481 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC3O60481 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC3O60481 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC3O60481 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC3O60481 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.31■□□□□ 0.2
ZIC3O60481 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC3O60481 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms