Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA12O60330 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA12O60330 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PCDHGA12O60330 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PCDHGA12O60330 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA12O60330 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHGA12O60330 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA12O60330 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA12O60330 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHGA12O60330 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PCDHGA12O60330 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA12O60330 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA12O60330 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA12O60330 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA12O60330 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
PCDHGA12O60330 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA12O60330 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
PCDHGA12O60330 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PCDHGA12O60330 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA12O60330 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA12O60330 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA12O60330 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.02■□□□□ 0.48
PCDHGA12O60330 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHGA12O60330 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHGA12O60330 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHGA12O60330 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.02■□□□□ 0.48
PCDHGA12O60330 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHGA12O60330 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA12O60330 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA12O60330 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA12O60330 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHGA12O60330 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHGA12O60330 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.02■□□□□ 0.47
PCDHGA12O60330 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
PCDHGA12O60330 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHGA12O60330 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
PCDHGA12O60330 AL353692.3-201ENST00000407031 1396 ntBASIC18.02■□□□□ 0.47
PCDHGA12O60330 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
PCDHGA12O60330 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
PCDHGA12O60330 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA12O60330 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHGA12O60330 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA12O60330 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA12O60330 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA12O60330 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHGA12O60330 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHGA12O60330 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA12O60330 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA12O60330 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA12O60330 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA12O60330 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
PCDHGA12O60330 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA12O60330 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
PCDHGA12O60330 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA12O60330 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHGA12O60330 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA12O60330 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA12O60330 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
PCDHGA12O60330 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHGA12O60330 POM121L3P-201ENST00000419331 1163 ntBASIC18.01■□□□□ 0.47
PCDHGA12O60330 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.01■□□□□ 0.47
PCDHGA12O60330 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHGA12O60330 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHGA12O60330 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHGA12O60330 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.01■□□□□ 0.47
PCDHGA12O60330 AC120114.3-201ENST00000611923 658 ntBASIC18.01■□□□□ 0.47
PCDHGA12O60330 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PCDHGA12O60330 AC117500.6-201ENST00000624871 588 ntBASIC18.01■□□□□ 0.47
PCDHGA12O60330 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHGA12O60330 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHGA12O60330 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA12O60330 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA12O60330 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA12O60330 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA12O60330 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
PCDHGA12O60330 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHGA12O60330 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHGA12O60330 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHGA12O60330 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA12O60330 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHGA12O60330 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHGA12O60330 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA12O60330 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PCDHGA12O60330 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA12O60330 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
PCDHGA12O60330 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18■□□□□ 0.47
PCDHGA12O60330 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
PCDHGA12O60330 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA12O60330 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18■□□□□ 0.47
PCDHGA12O60330 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA12O60330 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA12O60330 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA12O60330 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
PCDHGA12O60330 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18■□□□□ 0.47
PCDHGA12O60330 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18■□□□□ 0.47
PCDHGA12O60330 AL590627.1-203ENST00000421194 1026 ntBASIC18■□□□□ 0.47
PCDHGA12O60330 TSPY12P-201ENST00000421279 868 ntBASIC18■□□□□ 0.47
PCDHGA12O60330 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PCDHGA12O60330 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA12O60330 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms