Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.16■□□□□ 0.34
URB1O60287 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
URB1O60287 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
URB1O60287 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.16■□□□□ 0.34
URB1O60287 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
URB1O60287 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
URB1O60287 BCL2-203ENST00000589955 5011 ntBASIC17.16■□□□□ 0.34
URB1O60287 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
URB1O60287 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
URB1O60287 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
URB1O60287 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
URB1O60287 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
URB1O60287 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.16■□□□□ 0.34
URB1O60287 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.16■□□□□ 0.34
URB1O60287 MCCD1P2-201ENST00000423228 335 ntBASIC17.16■□□□□ 0.34
URB1O60287 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
URB1O60287 AC092910.1-201ENST00000482027 1129 ntBASIC17.16■□□□□ 0.34
URB1O60287 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
URB1O60287 RNA5SP416-201ENST00000516838 111 ntBASIC17.16■□□□□ 0.34
URB1O60287 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.16■□□□□ 0.34
URB1O60287 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
URB1O60287 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.16■□□□□ 0.34
URB1O60287 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
URB1O60287 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.15■□□□□ 0.34
URB1O60287 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.15■□□□□ 0.34
URB1O60287 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
URB1O60287 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
URB1O60287 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
URB1O60287 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
URB1O60287 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.15■□□□□ 0.34
URB1O60287 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
URB1O60287 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
URB1O60287 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
URB1O60287 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
URB1O60287 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
URB1O60287 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
URB1O60287 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
URB1O60287 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
URB1O60287 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
URB1O60287 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
URB1O60287 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.15■□□□□ 0.34
URB1O60287 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.15■□□□□ 0.34
URB1O60287 UNC93B6-202ENST00000528242 690 ntBASIC17.15■□□□□ 0.34
URB1O60287 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.15■□□□□ 0.34
URB1O60287 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.15■□□□□ 0.34
URB1O60287 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
URB1O60287 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
URB1O60287 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.15■□□□□ 0.34
URB1O60287 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.15■□□□□ 0.34
URB1O60287 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
URB1O60287 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
URB1O60287 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
URB1O60287 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.15■□□□□ 0.34
URB1O60287 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
URB1O60287 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
URB1O60287 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
URB1O60287 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
URB1O60287 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.14■□□□□ 0.34
URB1O60287 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
URB1O60287 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
URB1O60287 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
URB1O60287 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.14■□□□□ 0.33
URB1O60287 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.14■□□□□ 0.33
URB1O60287 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.14■□□□□ 0.33
URB1O60287 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.14■□□□□ 0.33
URB1O60287 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
URB1O60287 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
URB1O60287 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
URB1O60287 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
URB1O60287 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
URB1O60287 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
URB1O60287 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
URB1O60287 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
URB1O60287 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
URB1O60287 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
URB1O60287 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
URB1O60287 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
URB1O60287 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
URB1O60287 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
URB1O60287 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
URB1O60287 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
URB1O60287 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.14■□□□□ 0.33
URB1O60287 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
URB1O60287 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.14■□□□□ 0.33
URB1O60287 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
URB1O60287 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.14■□□□□ 0.33
URB1O60287 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
URB1O60287 CNN2P11-201ENST00000429351 262 ntBASIC17.14■□□□□ 0.33
URB1O60287 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.14■□□□□ 0.33
URB1O60287 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.14■□□□□ 0.33
URB1O60287 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.14■□□□□ 0.33
URB1O60287 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.14■□□□□ 0.33
URB1O60287 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
URB1O60287 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
URB1O60287 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
URB1O60287 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.14■□□□□ 0.33
URB1O60287 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.14■□□□□ 0.33
URB1O60287 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.14■□□□□ 0.33
URB1O60287 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
URB1O60287 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms