Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RNF13O43567 KRT8P50-201ENST00000562022 1438 ntBASIC16.59■□□□□ 0.25
RNF13O43567 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF13O43567 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF13O43567 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF13O43567 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF13O43567 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF13O43567 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF13O43567 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF13O43567 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF13O43567 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF13O43567 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF13O43567 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.58■□□□□ 0.25
RNF13O43567 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
RNF13O43567 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF13O43567 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF13O43567 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.58■□□□□ 0.25
RNF13O43567 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF13O43567 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF13O43567 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.25
RNF13O43567 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RNF13O43567 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF13O43567 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF13O43567 TSPY14P-201ENST00000303979 915 ntBASIC16.58■□□□□ 0.24
RNF13O43567 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.58■□□□□ 0.24
RNF13O43567 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
RNF13O43567 KRT18P23-201ENST00000435622 1283 ntBASIC16.58■□□□□ 0.24
RNF13O43567 TSPY15P-201ENST00000457163 923 ntBASIC16.58■□□□□ 0.24
RNF13O43567 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF13O43567 AC128688.1-201ENST00000487626 519 ntBASIC16.58■□□□□ 0.24
RNF13O43567 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF13O43567 AC093827.2-201ENST00000512654 315 ntBASIC16.58■□□□□ 0.24
RNF13O43567 NAPSB-206ENST00000562112 1266 ntBASIC16.58■□□□□ 0.24
RNF13O43567 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF13O43567 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF13O43567 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
RNF13O43567 CR769767.2-201ENST00000622735 460 ntBASIC16.58■□□□□ 0.24
RNF13O43567 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF13O43567 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RNF13O43567 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RNF13O43567 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF13O43567 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF13O43567 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RNF13O43567 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF13O43567 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF13O43567 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF13O43567 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF13O43567 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF13O43567 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF13O43567 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RNF13O43567 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF13O43567 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RNF13O43567 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF13O43567 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF13O43567 AC139713.2-201ENST00000641328 2723 ntBASIC16.58■□□□□ 0.24
RNF13O43567 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF13O43567 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF13O43567 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF13O43567 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF13O43567 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RNF13O43567 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF13O43567 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RNF13O43567 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF13O43567 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF13O43567 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF13O43567 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF13O43567 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF13O43567 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF13O43567 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF13O43567 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF13O43567 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF13O43567 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF13O43567 MMP23A-201ENST00000234610 1017 ntBASIC16.57■□□□□ 0.24
RNF13O43567 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF13O43567 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF13O43567 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RNF13O43567 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF13O43567 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.57■□□□□ 0.24
RNF13O43567 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.57■□□□□ 0.24
RNF13O43567 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF13O43567 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF13O43567 EGLN1P1-201ENST00000531623 762 ntBASIC16.57■□□□□ 0.24
RNF13O43567 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF13O43567 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.57■□□□□ 0.24
RNF13O43567 AC010653.2-201ENST00000623505 997 ntBASIC16.57■□□□□ 0.24
RNF13O43567 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.57■□□□□ 0.24
RNF13O43567 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.57■□□□□ 0.24
RNF13O43567 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RNF13O43567 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF13O43567 AC099343.3-201ENST00000605834 2503 ntBASIC16.57■□□□□ 0.24
RNF13O43567 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
RNF13O43567 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF13O43567 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
RNF13O43567 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF13O43567 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF13O43567 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RNF13O43567 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF13O43567 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF13O43567 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF13O43567 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms