Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RIPK2O43353 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RIPK2O43353 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.5■□□□□ 0.55
RIPK2O43353 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.5■□□□□ 0.55
RIPK2O43353 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.5■□□□□ 0.55
RIPK2O43353 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RIPK2O43353 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.5■□□□□ 0.55
RIPK2O43353 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RIPK2O43353 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.5■□□□□ 0.55
RIPK2O43353 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RIPK2O43353 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RIPK2O43353 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.5■□□□□ 0.55
RIPK2O43353 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.5■□□□□ 0.55
RIPK2O43353 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
RIPK2O43353 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.5■□□□□ 0.55
RIPK2O43353 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RIPK2O43353 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RIPK2O43353 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RIPK2O43353 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RIPK2O43353 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
RIPK2O43353 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RIPK2O43353 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RIPK2O43353 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RIPK2O43353 LINC01126-201ENST00000623515 1646 ntBASIC18.49■□□□□ 0.55
RIPK2O43353 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RIPK2O43353 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RIPK2O43353 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RIPK2O43353 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RIPK2O43353 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RIPK2O43353 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RIPK2O43353 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RIPK2O43353 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
RIPK2O43353 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RIPK2O43353 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.49■□□□□ 0.55
RIPK2O43353 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.49■□□□□ 0.55
RIPK2O43353 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RIPK2O43353 CR392000.1-201ENST00000624770 1228 ntBASIC18.49■□□□□ 0.55
RIPK2O43353 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RIPK2O43353 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
RIPK2O43353 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RIPK2O43353 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RIPK2O43353 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RIPK2O43353 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
RIPK2O43353 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RIPK2O43353 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RIPK2O43353 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.49■□□□□ 0.55
RIPK2O43353 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RIPK2O43353 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RIPK2O43353 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.49■□□□□ 0.55
RIPK2O43353 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RIPK2O43353 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.48■□□□□ 0.55
RIPK2O43353 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
RIPK2O43353 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RIPK2O43353 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RIPK2O43353 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RIPK2O43353 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
RIPK2O43353 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RIPK2O43353 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RIPK2O43353 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.48■□□□□ 0.55
RIPK2O43353 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RIPK2O43353 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RIPK2O43353 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.48■□□□□ 0.55
RIPK2O43353 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RIPK2O43353 B3GAT3P1-201ENST00000471720 806 ntBASIC18.48■□□□□ 0.55
RIPK2O43353 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.48■□□□□ 0.55
RIPK2O43353 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.48■□□□□ 0.55
RIPK2O43353 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.48■□□□□ 0.55
RIPK2O43353 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RIPK2O43353 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RIPK2O43353 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RIPK2O43353 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.48■□□□□ 0.55
RIPK2O43353 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RIPK2O43353 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RIPK2O43353 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.48■□□□□ 0.55
RIPK2O43353 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
RIPK2O43353 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
RIPK2O43353 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RIPK2O43353 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RIPK2O43353 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RIPK2O43353 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RIPK2O43353 AC036111.1-201ENST00000533973 1582 ntBASIC18.47■□□□□ 0.55
RIPK2O43353 AL138688.1-201ENST00000624851 1594 ntBASIC18.47■□□□□ 0.55
RIPK2O43353 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RIPK2O43353 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.47■□□□□ 0.55
RIPK2O43353 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.47■□□□□ 0.55
RIPK2O43353 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RIPK2O43353 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RIPK2O43353 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
RIPK2O43353 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RIPK2O43353 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RIPK2O43353 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.47■□□□□ 0.55
RIPK2O43353 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.47■□□□□ 0.55
RIPK2O43353 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.47■□□□□ 0.55
RIPK2O43353 MIR6786-201ENST00000616843 113 ntBASIC18.47■□□□□ 0.55
RIPK2O43353 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.47■□□□□ 0.55
RIPK2O43353 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RIPK2O43353 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RIPK2O43353 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RIPK2O43353 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RIPK2O43353 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms