Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.78■□□□□ 0.92
ATP2A1O14983 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
ATP2A1O14983 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.78■□□□□ 0.92
ATP2A1O14983 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.78■□□□□ 0.92
ATP2A1O14983 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.78■□□□□ 0.92
ATP2A1O14983 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.78■□□□□ 0.92
ATP2A1O14983 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.78■□□□□ 0.92
ATP2A1O14983 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A1O14983 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A1O14983 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
ATP2A1O14983 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A1O14983 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.78■□□□□ 0.92
ATP2A1O14983 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A1O14983 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A1O14983 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.78■□□□□ 0.92
ATP2A1O14983 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
ATP2A1O14983 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
ATP2A1O14983 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
ATP2A1O14983 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
ATP2A1O14983 INTS4P1-201ENST00000438455 1935 ntBASIC20.77■□□□□ 0.92
ATP2A1O14983 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATP2A1O14983 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP2A1O14983 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP2A1O14983 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP2A1O14983 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP2A1O14983 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
ATP2A1O14983 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.77■□□□□ 0.92
ATP2A1O14983 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.77■□□□□ 0.92
ATP2A1O14983 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.77■□□□□ 0.92
ATP2A1O14983 AC011467.2-201ENST00000598425 242 ntBASIC20.77■□□□□ 0.92
ATP2A1O14983 BX640515.1-201ENST00000617215 977 ntBASIC20.77■□□□□ 0.92
ATP2A1O14983 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
ATP2A1O14983 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP2A1O14983 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP2A1O14983 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
ATP2A1O14983 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.77■□□□□ 0.92
ATP2A1O14983 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP2A1O14983 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ATP2A1O14983 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
ATP2A1O14983 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATP2A1O14983 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ATP2A1O14983 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2A1O14983 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP2A1O14983 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2A1O14983 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2A1O14983 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2A1O14983 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2A1O14983 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2A1O14983 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ATP2A1O14983 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2A1O14983 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
ATP2A1O14983 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2A1O14983 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP2A1O14983 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.76■□□□□ 0.91
ATP2A1O14983 RBM17P3-201ENST00000417687 1192 ntBASIC20.76■□□□□ 0.91
ATP2A1O14983 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2A1O14983 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.76■□□□□ 0.91
ATP2A1O14983 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.76■□□□□ 0.91
ATP2A1O14983 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2A1O14983 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.76■□□□□ 0.91
ATP2A1O14983 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.76■□□□□ 0.91
ATP2A1O14983 AL355877.3-201ENST00000622820 899 ntBASIC20.76■□□□□ 0.91
ATP2A1O14983 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.76■□□□□ 0.91
ATP2A1O14983 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2A1O14983 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP2A1O14983 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.76■□□□□ 0.91
ATP2A1O14983 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP2A1O14983 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2A1O14983 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2A1O14983 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2A1O14983 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2A1O14983 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A1O14983 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
ATP2A1O14983 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A1O14983 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
ATP2A1O14983 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A1O14983 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.75■□□□□ 0.91
ATP2A1O14983 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A1O14983 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A1O14983 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A1O14983 KRT18P67-201ENST00000432816 1264 ntBASIC20.75■□□□□ 0.91
ATP2A1O14983 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A1O14983 FAM197Y8-203ENST00000450145 560 ntBASIC20.75■□□□□ 0.91
ATP2A1O14983 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.75■□□□□ 0.91
ATP2A1O14983 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.75■□□□□ 0.91
ATP2A1O14983 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP2A1O14983 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A1O14983 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A1O14983 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP2A1O14983 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A1O14983 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A1O14983 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A1O14983 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.75■□□□□ 0.91
ATP2A1O14983 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A1O14983 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A1O14983 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A1O14983 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A1O14983 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A1O14983 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ATP2A1O14983 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms