Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
NDUFA4O00483 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA4O00483 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
NDUFA4O00483 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA4O00483 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA4O00483 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA4O00483 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC13.97□□□□□ -0.17
NDUFA4O00483 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NDUFA4O00483 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA4O00483 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA4O00483 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA4O00483 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA4O00483 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NDUFA4O00483 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
NDUFA4O00483 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NDUFA4O00483 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
NDUFA4O00483 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC13.97□□□□□ -0.17
NDUFA4O00483 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC13.97□□□□□ -0.17
NDUFA4O00483 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NDUFA4O00483 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC13.97□□□□□ -0.17
NDUFA4O00483 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC13.96□□□□□ -0.17
NDUFA4O00483 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC13.96□□□□□ -0.17
NDUFA4O00483 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA4O00483 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA4O00483 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA4O00483 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC13.96□□□□□ -0.17
NDUFA4O00483 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA4O00483 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA4O00483 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
NDUFA4O00483 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA4O00483 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
NDUFA4O00483 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.96□□□□□ -0.17
NDUFA4O00483 KRT89P-201ENST00000620027 1478 ntBASIC13.96□□□□□ -0.17
NDUFA4O00483 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA4O00483 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA4O00483 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA4O00483 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA4O00483 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA4O00483 AL136038.4-201ENST00000603606 1261 ntBASIC13.96□□□□□ -0.17
NDUFA4O00483 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA4O00483 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.96□□□□□ -0.17
NDUFA4O00483 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA4O00483 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA4O00483 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC13.96□□□□□ -0.17
NDUFA4O00483 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA4O00483 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA4O00483 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA4O00483 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NDUFA4O00483 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
NDUFA4O00483 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NDUFA4O00483 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.96□□□□□ -0.18
NDUFA4O00483 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NDUFA4O00483 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NDUFA4O00483 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.96□□□□□ -0.18
NDUFA4O00483 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
NDUFA4O00483 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC13.95□□□□□ -0.18
NDUFA4O00483 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.95□□□□□ -0.18
NDUFA4O00483 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC13.95□□□□□ -0.18
NDUFA4O00483 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC13.95□□□□□ -0.18
NDUFA4O00483 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
NDUFA4O00483 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
NDUFA4O00483 SLC25A6P5-201ENST00000435663 894 ntBASIC13.95□□□□□ -0.18
NDUFA4O00483 AC092647.4-201ENST00000457211 535 ntBASIC13.95□□□□□ -0.18
NDUFA4O00483 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 AC113404.2-201ENST00000507884 177 ntBASIC13.95□□□□□ -0.18
NDUFA4O00483 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.95□□□□□ -0.18
NDUFA4O00483 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC13.95□□□□□ -0.18
NDUFA4O00483 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.95□□□□□ -0.18
NDUFA4O00483 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.95□□□□□ -0.18
NDUFA4O00483 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 USF2-205ENST00000594064 1179 ntTSL 2 BASIC13.95□□□□□ -0.18
NDUFA4O00483 AC024563.2-201ENST00000603282 481 ntBASIC13.95□□□□□ -0.18
NDUFA4O00483 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
NDUFA4O00483 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC13.95□□□□□ -0.18
NDUFA4O00483 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
NDUFA4O00483 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 AL391807.1-203ENST00000604392 2365 ntBASIC13.95□□□□□ -0.18
NDUFA4O00483 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms