Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
O00370 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.4■□□□□ 0.7
O00370 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.4■□□□□ 0.7
O00370 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.4■□□□□ 0.7
O00370 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.4■□□□□ 0.7
O00370 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
O00370 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
O00370 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
O00370 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
O00370 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
O00370 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
O00370 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
O00370 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
O00370 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.4■□□□□ 0.7
O00370 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
O00370 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
O00370 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
O00370 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
O00370 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
O00370 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
O00370 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
O00370 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
O00370 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.39■□□□□ 0.69
O00370 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
O00370 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
O00370 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
O00370 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
O00370 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.39■□□□□ 0.69
O00370 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.39■□□□□ 0.69
O00370 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.39■□□□□ 0.69
O00370 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.39■□□□□ 0.69
O00370 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
O00370 AC083849.1-201ENST00000615227 514 ntBASIC19.39■□□□□ 0.69
O00370 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.39■□□□□ 0.69
O00370 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
O00370 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
O00370 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
O00370 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
O00370 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
O00370 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.39■□□□□ 0.69
O00370 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
O00370 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.39■□□□□ 0.69
O00370 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
O00370 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
O00370 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.39■□□□□ 0.69
O00370 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
O00370 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
O00370 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
O00370 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
O00370 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
O00370 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
O00370 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
O00370 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
O00370 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
O00370 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.38■□□□□ 0.69
O00370 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
O00370 SPDYE13P-201ENST00000445314 798 ntBASIC19.38■□□□□ 0.69
O00370 AL671277.2-201ENST00000458060 996 ntBASIC19.38■□□□□ 0.69
O00370 AC068880.1-201ENST00000507289 2297 ntBASIC19.38■□□□□ 0.69
O00370 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
O00370 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.38■□□□□ 0.69
O00370 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.38■□□□□ 0.69
O00370 NTF6B-201ENST00000591913 560 ntBASIC19.38■□□□□ 0.69
O00370 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
O00370 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.38■□□□□ 0.69
O00370 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.38■□□□□ 0.69
O00370 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
O00370 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
O00370 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
O00370 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
O00370 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
O00370 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
O00370 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.37■□□□□ 0.69
O00370 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.37■□□□□ 0.69
O00370 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
O00370 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.37■□□□□ 0.69
O00370 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
O00370 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
O00370 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
O00370 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
O00370 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.37■□□□□ 0.69
O00370 LINC01311-201ENST00000565162 1445 ntBASIC19.37■□□□□ 0.69
O00370 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
O00370 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
O00370 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
O00370 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.37■□□□□ 0.69
O00370 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.37■□□□□ 0.69
O00370 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.37■□□□□ 0.69
O00370 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.37■□□□□ 0.69
O00370 AL590326.2-201ENST00000625139 305 ntBASIC19.37■□□□□ 0.69
O00370 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.37■□□□□ 0.69
O00370 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
O00370 AC067852.2-201ENST00000590513 2313 ntBASIC19.37■□□□□ 0.69
O00370 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
O00370 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.37■□□□□ 0.69
O00370 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
O00370 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
O00370 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
O00370 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.37■□□□□ 0.69
O00370 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms