Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.4■□□□□ 0.54
AP3B1O00203 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
AP3B1O00203 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.4■□□□□ 0.54
AP3B1O00203 DUTP2-201ENST00000519164 463 ntBASIC18.4■□□□□ 0.54
AP3B1O00203 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP3B1O00203 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP3B1O00203 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
AP3B1O00203 MIR3917-201ENST00000580971 93 ntBASIC18.4■□□□□ 0.54
AP3B1O00203 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
AP3B1O00203 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP3B1O00203 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP3B1O00203 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP3B1O00203 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
AP3B1O00203 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
AP3B1O00203 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP3B1O00203 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
AP3B1O00203 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
AP3B1O00203 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
AP3B1O00203 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP3B1O00203 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
AP3B1O00203 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
AP3B1O00203 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP3B1O00203 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.4■□□□□ 0.54
AP3B1O00203 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.4■□□□□ 0.54
AP3B1O00203 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
AP3B1O00203 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
AP3B1O00203 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.54
AP3B1O00203 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.39■□□□□ 0.54
AP3B1O00203 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
AP3B1O00203 AL133373.2-201ENST00000623187 2828 ntBASIC18.39■□□□□ 0.53
AP3B1O00203 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
AP3B1O00203 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.39■□□□□ 0.53
AP3B1O00203 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3B1O00203 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.39■□□□□ 0.53
AP3B1O00203 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3B1O00203 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3B1O00203 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3B1O00203 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.39■□□□□ 0.53
AP3B1O00203 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.39■□□□□ 0.53
AP3B1O00203 ECEL1P2-202ENST00000465689 757 ntBASIC18.39■□□□□ 0.53
AP3B1O00203 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.39■□□□□ 0.53
AP3B1O00203 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.39■□□□□ 0.53
AP3B1O00203 AC024243.1-201ENST00000609234 778 ntBASIC18.39■□□□□ 0.53
AP3B1O00203 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
AP3B1O00203 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3B1O00203 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3B1O00203 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3B1O00203 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3B1O00203 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
AP3B1O00203 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.39■□□□□ 0.53
AP3B1O00203 LINC01568-207ENST00000641790 1380 ntBASIC18.39■□□□□ 0.53
AP3B1O00203 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3B1O00203 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.39■□□□□ 0.53
AP3B1O00203 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3B1O00203 KRT8P9-201ENST00000558927 1449 ntBASIC18.39■□□□□ 0.53
AP3B1O00203 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3B1O00203 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3B1O00203 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AP3B1O00203 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3B1O00203 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3B1O00203 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3B1O00203 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.38■□□□□ 0.53
AP3B1O00203 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3B1O00203 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.38■□□□□ 0.53
AP3B1O00203 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3B1O00203 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AP3B1O00203 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.38■□□□□ 0.53
AP3B1O00203 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3B1O00203 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
AP3B1O00203 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.38■□□□□ 0.53
AP3B1O00203 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.38■□□□□ 0.53
AP3B1O00203 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.38■□□□□ 0.53
AP3B1O00203 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
AP3B1O00203 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.38■□□□□ 0.53
AP3B1O00203 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AP3B1O00203 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.38■□□□□ 0.53
AP3B1O00203 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3B1O00203 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3B1O00203 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
AP3B1O00203 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3B1O00203 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AP3B1O00203 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3B1O00203 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AP3B1O00203 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3B1O00203 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3B1O00203 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.37■□□□□ 0.53
AP3B1O00203 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.37■□□□□ 0.53
AP3B1O00203 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3B1O00203 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.37■□□□□ 0.53
AP3B1O00203 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AP3B1O00203 ECEL1P3-201ENST00000427961 737 ntBASIC18.37■□□□□ 0.53
AP3B1O00203 PVRIG2P-201ENST00000435460 978 ntBASIC18.37■□□□□ 0.53
AP3B1O00203 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.37■□□□□ 0.53
AP3B1O00203 TSPY15P-201ENST00000457163 923 ntBASIC18.37■□□□□ 0.53
AP3B1O00203 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.37■□□□□ 0.53
AP3B1O00203 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.37■□□□□ 0.53
AP3B1O00203 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.37■□□□□ 0.53
AP3B1O00203 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
AP3B1O00203 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.37■□□□□ 0.53
AP3B1O00203 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms