Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 AC096582.2-201ENST00000510860 516 ntBASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TBC1D3FA6NER0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
TBC1D3FA6NER0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.08■□□□□ 0.49
TBC1D3FA6NER0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TBC1D3FA6NER0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.08■□□□□ 0.49
TBC1D3FA6NER0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TBC1D3FA6NER0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.08■□□□□ 0.49
TBC1D3FA6NER0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TBC1D3FA6NER0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TBC1D3FA6NER0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TBC1D3FA6NER0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TBC1D3FA6NER0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
TBC1D3FA6NER0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
TBC1D3FA6NER0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TBC1D3FA6NER0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.08■□□□□ 0.48
TBC1D3FA6NER0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.08■□□□□ 0.48
TBC1D3FA6NER0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
TBC1D3FA6NER0 MIR5100-201ENST00000579544 119 ntBASIC18.08■□□□□ 0.48
TBC1D3FA6NER0 BNIP3P18-201ENST00000593976 575 ntBASIC18.08■□□□□ 0.48
TBC1D3FA6NER0 AC009154.2-201ENST00000621177 724 ntBASIC18.08■□□□□ 0.48
TBC1D3FA6NER0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TBC1D3FA6NER0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TBC1D3FA6NER0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TBC1D3FA6NER0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TBC1D3FA6NER0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
TBC1D3FA6NER0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 SAPCD2P3-201ENST00000455031 850 ntBASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 REXO1L6P-202ENST00000619970 1078 ntBASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 AC018445.3-201ENST00000624177 1945 ntBASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3FA6NER0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 AKR1C7P-201ENST00000305623 895 ntBASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms