Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RCCD1A6NED2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RCCD1A6NED2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RCCD1A6NED2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.34■□□□□ 0.69
RCCD1A6NED2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.34■□□□□ 0.69
RCCD1A6NED2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.34■□□□□ 0.69
RCCD1A6NED2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.34■□□□□ 0.69
RCCD1A6NED2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.34■□□□□ 0.69
RCCD1A6NED2 CR769767.2-201ENST00000622735 460 ntBASIC19.34■□□□□ 0.69
RCCD1A6NED2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RCCD1A6NED2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RCCD1A6NED2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.34■□□□□ 0.69
RCCD1A6NED2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RCCD1A6NED2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RCCD1A6NED2 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RCCD1A6NED2 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RCCD1A6NED2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RCCD1A6NED2 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RCCD1A6NED2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.34■□□□□ 0.69
RCCD1A6NED2 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RCCD1A6NED2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RCCD1A6NED2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
RCCD1A6NED2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RCCD1A6NED2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RCCD1A6NED2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RCCD1A6NED2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RCCD1A6NED2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RCCD1A6NED2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RCCD1A6NED2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RCCD1A6NED2 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RCCD1A6NED2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RCCD1A6NED2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RCCD1A6NED2 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RCCD1A6NED2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
RCCD1A6NED2 AP003041.3-201ENST00000527151 707 ntBASIC19.33■□□□□ 0.68
RCCD1A6NED2 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.33■□□□□ 0.68
RCCD1A6NED2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.33■□□□□ 0.68
RCCD1A6NED2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.68
RCCD1A6NED2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RCCD1A6NED2 AC113410.3-201ENST00000623366 203 ntBASIC19.33■□□□□ 0.68
RCCD1A6NED2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
RCCD1A6NED2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RCCD1A6NED2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RCCD1A6NED2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RCCD1A6NED2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
RCCD1A6NED2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RCCD1A6NED2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
RCCD1A6NED2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RCCD1A6NED2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RCCD1A6NED2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RCCD1A6NED2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.33■□□□□ 0.68
RCCD1A6NED2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RCCD1A6NED2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.33■□□□□ 0.68
RCCD1A6NED2 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RCCD1A6NED2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.32■□□□□ 0.68
RCCD1A6NED2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RCCD1A6NED2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RCCD1A6NED2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RCCD1A6NED2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
RCCD1A6NED2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RCCD1A6NED2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RCCD1A6NED2 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RCCD1A6NED2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RCCD1A6NED2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.32■□□□□ 0.68
RCCD1A6NED2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RCCD1A6NED2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RCCD1A6NED2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RCCD1A6NED2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
RCCD1A6NED2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.32■□□□□ 0.68
RCCD1A6NED2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RCCD1A6NED2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.32■□□□□ 0.68
RCCD1A6NED2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RCCD1A6NED2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RCCD1A6NED2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RCCD1A6NED2 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RCCD1A6NED2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RCCD1A6NED2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RCCD1A6NED2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RCCD1A6NED2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RCCD1A6NED2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RCCD1A6NED2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RCCD1A6NED2 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RCCD1A6NED2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
RCCD1A6NED2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RCCD1A6NED2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RCCD1A6NED2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RCCD1A6NED2 AC124067.4-201ENST00000519691 2379 ntBASIC19.31■□□□□ 0.68
RCCD1A6NED2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RCCD1A6NED2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.31■□□□□ 0.68
RCCD1A6NED2 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.31■□□□□ 0.68
RCCD1A6NED2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.31■□□□□ 0.68
RCCD1A6NED2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.31■□□□□ 0.68
RCCD1A6NED2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.31■□□□□ 0.68
RCCD1A6NED2 AL023806.1-201ENST00000603994 1649 ntBASIC19.31■□□□□ 0.68
RCCD1A6NED2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RCCD1A6NED2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RCCD1A6NED2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.31■□□□□ 0.68
RCCD1A6NED2 AL135905.2-201ENST00000584934 1404 ntBASIC19.31■□□□□ 0.68
RCCD1A6NED2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.31■□□□□ 0.68
RCCD1A6NED2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms