Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
TCRBV9S1A1TA0A576 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV9S1A1TA0A576 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.33■□□□□ 0.52
TCRBV9S1A1TA0A576 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV9S1A1TA0A576 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.33■□□□□ 0.52
TCRBV9S1A1TA0A576 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV9S1A1TA0A576 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV9S1A1TA0A576 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV9S1A1TA0A576 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV9S1A1TA0A576 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV9S1A1TA0A576 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV9S1A1TA0A576 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV9S1A1TA0A576 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV9S1A1TA0A576 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV9S1A1TA0A576 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.33■□□□□ 0.52
TCRBV9S1A1TA0A576 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TCRBV9S1A1TA0A576 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV9S1A1TA0A576 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV9S1A1TA0A576 AC141586.5-201ENST00000624546 2050 ntBASIC18.32■□□□□ 0.52
TCRBV9S1A1TA0A576 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TCRBV9S1A1TA0A576 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
TCRBV9S1A1TA0A576 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV9S1A1TA0A576 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.32■□□□□ 0.52
TCRBV9S1A1TA0A576 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.32■□□□□ 0.52
TCRBV9S1A1TA0A576 SLC25A1P2-201ENST00000430693 912 ntBASIC18.32■□□□□ 0.52
TCRBV9S1A1TA0A576 AL355355.2-201ENST00000442321 338 ntBASIC18.32■□□□□ 0.52
TCRBV9S1A1TA0A576 UBE2SP1-201ENST00000450587 669 ntBASIC18.32■□□□□ 0.52
TCRBV9S1A1TA0A576 AL353719.1-201ENST00000566847 864 ntBASIC18.32■□□□□ 0.52
TCRBV9S1A1TA0A576 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.32■□□□□ 0.52
TCRBV9S1A1TA0A576 AC026471.5-201ENST00000615068 467 ntBASIC18.32■□□□□ 0.52
TCRBV9S1A1TA0A576 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV9S1A1TA0A576 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV9S1A1TA0A576 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TCRBV9S1A1TA0A576 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.32■□□□□ 0.52
TCRBV9S1A1TA0A576 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV9S1A1TA0A576 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV9S1A1TA0A576 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV9S1A1TA0A576 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV9S1A1TA0A576 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV9S1A1TA0A576 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 PRORSD1P-202ENST00000563365 2154 ntBASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCRBV9S1A1TA0A576 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.3■□□□□ 0.52
TCRBV9S1A1TA0A576 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCRBV9S1A1TA0A576 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCRBV9S1A1TA0A576 AC080080.1-201ENST00000625121 2420 ntBASIC18.3■□□□□ 0.52
TCRBV9S1A1TA0A576 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCRBV9S1A1TA0A576 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TCRBV9S1A1TA0A576 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TCRBV9S1A1TA0A576 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TCRBV9S1A1TA0A576 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCRBV9S1A1TA0A576 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TCRBV9S1A1TA0A576 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCRBV9S1A1TA0A576 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCRBV9S1A1TA0A576 GCSHP5-201ENST00000443090 522 ntBASIC18.3■□□□□ 0.52
TCRBV9S1A1TA0A576 TSPY17P-201ENST00000450329 467 ntBASIC18.3■□□□□ 0.52
TCRBV9S1A1TA0A576 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.3■□□□□ 0.52
TCRBV9S1A1TA0A576 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCRBV9S1A1TA0A576 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCRBV9S1A1TA0A576 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TCRBV9S1A1TA0A576 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCRBV9S1A1TA0A576 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TCRBV9S1A1TA0A576 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
TCRBV9S1A1TA0A576 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCRBV9S1A1TA0A576 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.3■□□□□ 0.52
TCRBV9S1A1TA0A576 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCRBV9S1A1TA0A576 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.29■□□□□ 0.52
TCRBV9S1A1TA0A576 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TCRBV9S1A1TA0A576 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TCRBV9S1A1TA0A576 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TCRBV9S1A1TA0A576 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TCRBV9S1A1TA0A576 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TCRBV9S1A1TA0A576 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms