Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
PCDHGA3Q9Y5H0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.71■□□□□ 0.42
PCDHGA3Q9Y5H0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHGA3Q9Y5H0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 AC104581.1-202ENST00000635932 2618 ntBASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 AC010240.3-201ENST00000607688 395 ntBASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 KRT18P1-202ENST00000452408 1331 ntBASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 AC135050.7-201ENST00000624508 2218 ntBASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PCDHGA3Q9Y5H0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 FDX1P1-201ENST00000449115 551 ntBASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 KRT17P6-201ENST00000453795 1220 ntBASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 MIR3180-4-201ENST00000582223 153 ntBASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA3Q9Y5H0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 TEX21P-204ENST00000641479 1693 ntBASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms