Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 FEM1AP3-201ENST00000403722 1741 ntBASIC17.02■□□□□ 0.32
PCDHGA9Q9Y5G4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA9Q9Y5G4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA9Q9Y5G4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA9Q9Y5G4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA9Q9Y5G4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA9Q9Y5G4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA9Q9Y5G4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA9Q9Y5G4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA9Q9Y5G4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
PCDHGA9Q9Y5G4 RN7SL606P-201ENST00000472779 293 ntBASIC17.02■□□□□ 0.32
PCDHGA9Q9Y5G4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.02■□□□□ 0.32
PCDHGA9Q9Y5G4 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHGA9Q9Y5G4 AC004263.2-201ENST00000617183 678 ntBASIC17.02■□□□□ 0.32
PCDHGA9Q9Y5G4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHGA9Q9Y5G4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGA9Q9Y5G4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGA9Q9Y5G4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGA9Q9Y5G4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.02■□□□□ 0.31
PCDHGA9Q9Y5G4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.02■□□□□ 0.31
PCDHGA9Q9Y5G4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGA9Q9Y5G4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.02■□□□□ 0.31
PCDHGA9Q9Y5G4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGA9Q9Y5G4 AC104581.1-202ENST00000635932 2618 ntBASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 AC006333.2-201ENST00000607957 2099 ntBASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 AC006538.3-201ENST00000612495 578 ntBASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA9Q9Y5G4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 SAPCD2P3-201ENST00000455031 850 ntBASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 PENK-208ENST00000523051 772 ntTSL 5 BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 AC064862.7-201ENST00000604520 867 ntBASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 AC124864.1-201ENST00000623408 392 ntBASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms