Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB6Q9Y5F9 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 AL031598.1-201ENST00000561511 1773 ntBASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 MIR3180-5-201ENST00000583743 153 ntBASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGB6Q9Y5F9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
PCDHGB6Q9Y5F9 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDHGB6Q9Y5F9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
PCDHGB6Q9Y5F9 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 GPAT2P1-201ENST00000444924 1672 ntBASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms