Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM17Q9Y577 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM17Q9Y577 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
TRIM17Q9Y577 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TRIM17Q9Y577 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.52■□□□□ 0.87
TRIM17Q9Y577 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
TRIM17Q9Y577 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 PRSS29P-201ENST00000440800 595 ntBASIC20.51■□□□□ 0.87
TRIM17Q9Y577 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 TAF8-206ENST00000472818 719 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 AC079776.2-201ENST00000641154 1609 ntBASIC20.51■□□□□ 0.87
TRIM17Q9Y577 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 AC099343.3-201ENST00000605834 2503 ntBASIC20.51■□□□□ 0.87
TRIM17Q9Y577 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TRIM17Q9Y577 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM17Q9Y577 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM17Q9Y577 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM17Q9Y577 GPR89P-201ENST00000407924 1495 ntBASIC20.5■□□□□ 0.87
TRIM17Q9Y577 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM17Q9Y577 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM17Q9Y577 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TRIM17Q9Y577 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM17Q9Y577 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.5■□□□□ 0.87
TRIM17Q9Y577 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.5■□□□□ 0.87
TRIM17Q9Y577 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.5■□□□□ 0.87
TRIM17Q9Y577 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM17Q9Y577 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.5■□□□□ 0.87
TRIM17Q9Y577 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM17Q9Y577 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM17Q9Y577 AC004449.1-201ENST00000564240 433 ntBASIC20.5■□□□□ 0.87
TRIM17Q9Y577 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.5■□□□□ 0.87
TRIM17Q9Y577 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.5■□□□□ 0.87
TRIM17Q9Y577 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM17Q9Y577 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRIM17Q9Y577 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM17Q9Y577 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
TRIM17Q9Y577 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM17Q9Y577 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM17Q9Y577 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM17Q9Y577 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM17Q9Y577 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.5■□□□□ 0.87
TRIM17Q9Y577 AC009102.3-201ENST00000623118 1491 ntBASIC20.5■□□□□ 0.87
TRIM17Q9Y577 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM17Q9Y577 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM17Q9Y577 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM17Q9Y577 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM17Q9Y577 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM17Q9Y577 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TRIM17Q9Y577 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM17Q9Y577 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM17Q9Y577 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.49■□□□□ 0.87
TRIM17Q9Y577 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.49■□□□□ 0.87
TRIM17Q9Y577 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.49■□□□□ 0.87
TRIM17Q9Y577 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM17Q9Y577 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM17Q9Y577 KRT18P41-201ENST00000518924 1277 ntBASIC20.49■□□□□ 0.87
TRIM17Q9Y577 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.49■□□□□ 0.87
TRIM17Q9Y577 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM17Q9Y577 AL031432.2-201ENST00000566714 459 ntBASIC20.49■□□□□ 0.87
TRIM17Q9Y577 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.49■□□□□ 0.87
TRIM17Q9Y577 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TRIM17Q9Y577 AL928711.1-201ENST00000570165 459 ntBASIC20.49■□□□□ 0.87
TRIM17Q9Y577 MIR4751-201ENST00000578027 74 ntBASIC20.49■□□□□ 0.87
TRIM17Q9Y577 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.49■□□□□ 0.87
TRIM17Q9Y577 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.49■□□□□ 0.87
TRIM17Q9Y577 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM17Q9Y577 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM17Q9Y577 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
TRIM17Q9Y577 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM17Q9Y577 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM17Q9Y577 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM17Q9Y577 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TRIM17Q9Y577 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM17Q9Y577 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TRIM17Q9Y577 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM17Q9Y577 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM17Q9Y577 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms