Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
R3HCC1Q9Y3T6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
R3HCC1Q9Y3T6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
R3HCC1Q9Y3T6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
R3HCC1Q9Y3T6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
R3HCC1Q9Y3T6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
R3HCC1Q9Y3T6 ANO7L1-203ENST00000602586 1720 ntBASIC20.87■□□□□ 0.93
R3HCC1Q9Y3T6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
R3HCC1Q9Y3T6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
R3HCC1Q9Y3T6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.87■□□□□ 0.93
R3HCC1Q9Y3T6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
R3HCC1Q9Y3T6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
R3HCC1Q9Y3T6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
R3HCC1Q9Y3T6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
R3HCC1Q9Y3T6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
R3HCC1Q9Y3T6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.87■□□□□ 0.93
R3HCC1Q9Y3T6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
R3HCC1Q9Y3T6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.87■□□□□ 0.93
R3HCC1Q9Y3T6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
R3HCC1Q9Y3T6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.87■□□□□ 0.93
R3HCC1Q9Y3T6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.87■□□□□ 0.93
R3HCC1Q9Y3T6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.87■□□□□ 0.93
R3HCC1Q9Y3T6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
R3HCC1Q9Y3T6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
R3HCC1Q9Y3T6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
R3HCC1Q9Y3T6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
R3HCC1Q9Y3T6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
R3HCC1Q9Y3T6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
R3HCC1Q9Y3T6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.87■□□□□ 0.93
R3HCC1Q9Y3T6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
R3HCC1Q9Y3T6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
R3HCC1Q9Y3T6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
R3HCC1Q9Y3T6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
R3HCC1Q9Y3T6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
R3HCC1Q9Y3T6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
R3HCC1Q9Y3T6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
R3HCC1Q9Y3T6 AC108860.2-201ENST00000562760 2183 ntBASIC20.86■□□□□ 0.93
R3HCC1Q9Y3T6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
R3HCC1Q9Y3T6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
R3HCC1Q9Y3T6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC20.86■□□□□ 0.93
R3HCC1Q9Y3T6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
R3HCC1Q9Y3T6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
R3HCC1Q9Y3T6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.86■□□□□ 0.93
R3HCC1Q9Y3T6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.86■□□□□ 0.93
R3HCC1Q9Y3T6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.86■□□□□ 0.93
R3HCC1Q9Y3T6 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
R3HCC1Q9Y3T6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
R3HCC1Q9Y3T6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
R3HCC1Q9Y3T6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
R3HCC1Q9Y3T6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
R3HCC1Q9Y3T6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
R3HCC1Q9Y3T6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
R3HCC1Q9Y3T6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
R3HCC1Q9Y3T6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
R3HCC1Q9Y3T6 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
R3HCC1Q9Y3T6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 AL596275.1-201ENST00000423464 877 ntBASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 AC026271.3-201ENST00000571884 352 ntBASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
R3HCC1Q9Y3T6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.84■□□□□ 0.93
R3HCC1Q9Y3T6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
R3HCC1Q9Y3T6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
R3HCC1Q9Y3T6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
R3HCC1Q9Y3T6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
R3HCC1Q9Y3T6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
R3HCC1Q9Y3T6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
R3HCC1Q9Y3T6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
R3HCC1Q9Y3T6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
R3HCC1Q9Y3T6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
R3HCC1Q9Y3T6 NUDT16P1-203ENST00000513809 620 ntBASIC20.84■□□□□ 0.93
R3HCC1Q9Y3T6 AP003071.4-201ENST00000562276 1284 ntBASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms