Protein–RNA interactions for Protein: Q9Y2Y8

PRG3, Proteoglycan 3, humanhuman

Predicted RBP Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG3Q9Y2Y8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRG3Q9Y2Y8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRG3Q9Y2Y8 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PRG3Q9Y2Y8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
PRG3Q9Y2Y8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRG3Q9Y2Y8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRG3Q9Y2Y8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRG3Q9Y2Y8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRG3Q9Y2Y8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRG3Q9Y2Y8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRG3Q9Y2Y8 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRG3Q9Y2Y8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRG3Q9Y2Y8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.43■□□□□ 0.7
PRG3Q9Y2Y8 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.43■□□□□ 0.7
PRG3Q9Y2Y8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.43■□□□□ 0.7
PRG3Q9Y2Y8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRG3Q9Y2Y8 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.43■□□□□ 0.7
PRG3Q9Y2Y8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.43■□□□□ 0.7
PRG3Q9Y2Y8 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
PRG3Q9Y2Y8 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
PRG3Q9Y2Y8 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PRG3Q9Y2Y8 AC009154.2-201ENST00000621177 724 ntBASIC19.43■□□□□ 0.7
PRG3Q9Y2Y8 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRG3Q9Y2Y8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRG3Q9Y2Y8 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.43■□□□□ 0.7
PRG3Q9Y2Y8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRG3Q9Y2Y8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRG3Q9Y2Y8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRG3Q9Y2Y8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRG3Q9Y2Y8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.42■□□□□ 0.7
PRG3Q9Y2Y8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRG3Q9Y2Y8 SLC25A24-204ENST00000569674 2357 ntBASIC19.42■□□□□ 0.7
PRG3Q9Y2Y8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRG3Q9Y2Y8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.42■□□□□ 0.7
PRG3Q9Y2Y8 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRG3Q9Y2Y8 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRG3Q9Y2Y8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRG3Q9Y2Y8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRG3Q9Y2Y8 RCN1P2-201ENST00000398357 915 ntBASIC19.42■□□□□ 0.7
PRG3Q9Y2Y8 MTCL1P1-201ENST00000446207 792 ntBASIC19.42■□□□□ 0.7
PRG3Q9Y2Y8 AC132008.2-207ENST00000454517 770 ntBASIC19.42■□□□□ 0.7
PRG3Q9Y2Y8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.42■□□□□ 0.7
PRG3Q9Y2Y8 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRG3Q9Y2Y8 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRG3Q9Y2Y8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.42■□□□□ 0.7
PRG3Q9Y2Y8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PRG3Q9Y2Y8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRG3Q9Y2Y8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRG3Q9Y2Y8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRG3Q9Y2Y8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
PRG3Q9Y2Y8 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
PRG3Q9Y2Y8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
PRG3Q9Y2Y8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.42■□□□□ 0.7
PRG3Q9Y2Y8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.42■□□□□ 0.7
PRG3Q9Y2Y8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRG3Q9Y2Y8 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRG3Q9Y2Y8 TP73-AS1-210ENST00000637775 1455 ntBASIC19.41■□□□□ 0.7
PRG3Q9Y2Y8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRG3Q9Y2Y8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.41■□□□□ 0.7
PRG3Q9Y2Y8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.41■□□□□ 0.7
PRG3Q9Y2Y8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRG3Q9Y2Y8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
PRG3Q9Y2Y8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.41■□□□□ 0.7
PRG3Q9Y2Y8 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.41■□□□□ 0.7
PRG3Q9Y2Y8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRG3Q9Y2Y8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.41■□□□□ 0.7
PRG3Q9Y2Y8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRG3Q9Y2Y8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRG3Q9Y2Y8 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.41■□□□□ 0.7
PRG3Q9Y2Y8 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.41■□□□□ 0.7
PRG3Q9Y2Y8 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRG3Q9Y2Y8 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms