Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 OR6D1P-202ENST00000641007 5290 ntBASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 IGHV3-47-201ENST00000425060 335 ntBASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 KRT16P4-201ENST00000453883 522 ntBASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 AL662844.1-201ENST00000546340 181 ntBASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 AC011840.4-201ENST00000578471 627 ntBASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 AC138894.3-201ENST00000603787 634 ntBASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 AC004408.2-201ENST00000623613 2777 ntBASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSX2IPQ9Y2D8 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 AL357033.4-201ENST00000617703 1807 ntBASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 AC104692.2-201ENST00000603054 253 ntBASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 KRT8P50-201ENST00000562022 1438 ntBASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SSX2IPQ9Y2D8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 AL353801.3-201ENST00000609898 542 ntBASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSX2IPQ9Y2D8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms