Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 ABHD17AP1-201ENST00000358206 933 ntBASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 RPS2P55-201ENST00000397318 883 ntBASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 AC098590.1-201ENST00000468126 897 ntBASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 AC107956.1-201ENST00000494359 873 ntBASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CHMP2BQ9UQN3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.55■□□□□ 0.56
CHMP2BQ9UQN3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CHMP2BQ9UQN3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP2BQ9UQN3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CHMP2BQ9UQN3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP2BQ9UQN3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP2BQ9UQN3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CHMP2BQ9UQN3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP2BQ9UQN3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CHMP2BQ9UQN3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP2BQ9UQN3 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.55■□□□□ 0.56
CHMP2BQ9UQN3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CHMP2BQ9UQN3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CHMP2BQ9UQN3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP2BQ9UQN3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.55■□□□□ 0.56
CHMP2BQ9UQN3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
CHMP2BQ9UQN3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CHMP2BQ9UQN3 AL158047.1-201ENST00000445918 881 ntBASIC18.55■□□□□ 0.56
CHMP2BQ9UQN3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP2BQ9UQN3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CHMP2BQ9UQN3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CHMP2BQ9UQN3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP2BQ9UQN3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CHMP2BQ9UQN3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP2BQ9UQN3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.55■□□□□ 0.56
CHMP2BQ9UQN3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 MIR149-201ENST00000384879 89 ntBASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 OR6D1P-202ENST00000641007 5290 ntBASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CHMP2BQ9UQN3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CHMP2BQ9UQN3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.53■□□□□ 0.56
CHMP2BQ9UQN3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2BQ9UQN3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms