Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 AC126763.1-201ENST00000552015 2118 ntBASIC19.93■□□□□ 0.78
L1RE1Q9UN81 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
L1RE1Q9UN81 AL357033.4-201ENST00000617703 1807 ntBASIC19.93■□□□□ 0.78
L1RE1Q9UN81 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.93■□□□□ 0.78
L1RE1Q9UN81 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.93■□□□□ 0.78
L1RE1Q9UN81 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
L1RE1Q9UN81 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
L1RE1Q9UN81 KRT18P23-201ENST00000435622 1283 ntBASIC19.93■□□□□ 0.78
L1RE1Q9UN81 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.93■□□□□ 0.78
L1RE1Q9UN81 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
L1RE1Q9UN81 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.93■□□□□ 0.78
L1RE1Q9UN81 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
L1RE1Q9UN81 AC087388.1-201ENST00000571370 1112 ntBASIC19.93■□□□□ 0.78
L1RE1Q9UN81 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
L1RE1Q9UN81 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.93■□□□□ 0.78
L1RE1Q9UN81 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
L1RE1Q9UN81 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
L1RE1Q9UN81 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
L1RE1Q9UN81 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
L1RE1Q9UN81 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.93■□□□□ 0.78
L1RE1Q9UN81 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
L1RE1Q9UN81 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.93■□□□□ 0.78
L1RE1Q9UN81 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
L1RE1Q9UN81 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
L1RE1Q9UN81 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
L1RE1Q9UN81 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
L1RE1Q9UN81 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.92■□□□□ 0.78
L1RE1Q9UN81 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.92■□□□□ 0.78
L1RE1Q9UN81 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
L1RE1Q9UN81 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
L1RE1Q9UN81 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
L1RE1Q9UN81 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
L1RE1Q9UN81 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
L1RE1Q9UN81 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
L1RE1Q9UN81 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
L1RE1Q9UN81 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.92■□□□□ 0.78
L1RE1Q9UN81 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.92■□□□□ 0.78
L1RE1Q9UN81 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
L1RE1Q9UN81 STARP1-201ENST00000397973 869 ntBASIC19.92■□□□□ 0.78
L1RE1Q9UN81 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.92■□□□□ 0.78
L1RE1Q9UN81 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.92■□□□□ 0.78
L1RE1Q9UN81 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.92■□□□□ 0.78
L1RE1Q9UN81 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.92■□□□□ 0.78
L1RE1Q9UN81 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
L1RE1Q9UN81 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
L1RE1Q9UN81 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
L1RE1Q9UN81 HOXB1-202ENST00000577092 1414 ntBASIC19.92■□□□□ 0.78
L1RE1Q9UN81 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
L1RE1Q9UN81 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
L1RE1Q9UN81 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
L1RE1Q9UN81 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 AC034236.2-201ENST00000606662 1610 ntBASIC19.91■□□□□ 0.78
L1RE1Q9UN81 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 AL031133.1-201ENST00000406807 723 ntBASIC19.91■□□□□ 0.78
L1RE1Q9UN81 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.91■□□□□ 0.78
L1RE1Q9UN81 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
L1RE1Q9UN81 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
L1RE1Q9UN81 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
L1RE1Q9UN81 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
L1RE1Q9UN81 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms