Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AC004263.2-201ENST00000617183 678 ntBASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 LINC00602-201ENST00000629776 2065 ntBASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 AC005332.1-201ENST00000577698 1310 ntBASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 GPR32P1-201ENST00000601788 811 ntBASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDHA4Q9UN74 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PCDHA4Q9UN74 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA4Q9UN74 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA4Q9UN74 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHA4Q9UN74 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHA4Q9UN74 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA4Q9UN74 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHA4Q9UN74 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA4Q9UN74 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHA4Q9UN74 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.78■□□□□ 0.92
PCDHA4Q9UN74 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.78■□□□□ 0.92
PCDHA4Q9UN74 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.78■□□□□ 0.92
PCDHA4Q9UN74 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHA4Q9UN74 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
PCDHA4Q9UN74 AL390719.2-201ENST00000606993 987 ntBASIC20.78■□□□□ 0.92
PCDHA4Q9UN74 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.78■□□□□ 0.92
PCDHA4Q9UN74 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA4Q9UN74 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PCDHA4Q9UN74 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA4Q9UN74 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA4Q9UN74 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA4Q9UN74 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA4Q9UN74 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA4Q9UN74 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PCDHA4Q9UN74 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA4Q9UN74 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA4Q9UN74 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.78■□□□□ 0.92
PCDHA4Q9UN74 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDHA4Q9UN74 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCDHA4Q9UN74 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.77■□□□□ 0.91
PCDHA4Q9UN74 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms