Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AL355877.3-201ENST00000622820 899 ntBASIC20.9■□□□□ 0.94
SYNPO2Q9UMS6 AP000974.1-201ENST00000623909 2387 ntBASIC20.9■□□□□ 0.94
SYNPO2Q9UMS6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYNPO2Q9UMS6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.9■□□□□ 0.94
SYNPO2Q9UMS6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.9■□□□□ 0.94
SYNPO2Q9UMS6 RNF165-205ENST00000588679 2904 ntBASIC20.9■□□□□ 0.94
SYNPO2Q9UMS6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SYNPO2Q9UMS6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SYNPO2Q9UMS6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYNPO2Q9UMS6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYNPO2Q9UMS6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.89■□□□□ 0.93
SYNPO2Q9UMS6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYNPO2Q9UMS6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYNPO2Q9UMS6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SYNPO2Q9UMS6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYNPO2Q9UMS6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SYNPO2Q9UMS6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.89■□□□□ 0.93
SYNPO2Q9UMS6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.89■□□□□ 0.93
SYNPO2Q9UMS6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.89■□□□□ 0.93
SYNPO2Q9UMS6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.89■□□□□ 0.93
SYNPO2Q9UMS6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.89■□□□□ 0.93
SYNPO2Q9UMS6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.89■□□□□ 0.93
SYNPO2Q9UMS6 AL138781.2-201ENST00000617896 1843 ntBASIC20.89■□□□□ 0.93
SYNPO2Q9UMS6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SYNPO2Q9UMS6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SYNPO2Q9UMS6 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SYNPO2Q9UMS6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYNPO2Q9UMS6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYNPO2Q9UMS6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SYNPO2Q9UMS6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SYNPO2Q9UMS6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYNPO2Q9UMS6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYNPO2Q9UMS6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.88■□□□□ 0.93
SYNPO2Q9UMS6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.88■□□□□ 0.93
SYNPO2Q9UMS6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYNPO2Q9UMS6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYNPO2Q9UMS6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.88■□□□□ 0.93
SYNPO2Q9UMS6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYNPO2Q9UMS6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYNPO2Q9UMS6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.88■□□□□ 0.93
SYNPO2Q9UMS6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYNPO2Q9UMS6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.88■□□□□ 0.93
SYNPO2Q9UMS6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYNPO2Q9UMS6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.88■□□□□ 0.93
SYNPO2Q9UMS6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.88■□□□□ 0.93
SYNPO2Q9UMS6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SYNPO2Q9UMS6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.88■□□□□ 0.93
SYNPO2Q9UMS6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYNPO2Q9UMS6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SYNPO2Q9UMS6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYNPO2Q9UMS6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.88■□□□□ 0.93
SYNPO2Q9UMS6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYNPO2Q9UMS6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 FAM220CP-201ENST00000395253 831 ntBASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNPO2Q9UMS6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 ABCD1P5-201ENST00000445663 754 ntBASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 AC008608.2-201ENST00000606089 416 ntBASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms