Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS45Q9NRW7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS45Q9NRW7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS45Q9NRW7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
VPS45Q9NRW7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VPS45Q9NRW7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
VPS45Q9NRW7 TSPY19P-201ENST00000418461 509 ntBASIC18.79■□□□□ 0.6
VPS45Q9NRW7 TSPY18P-201ENST00000441642 509 ntBASIC18.79■□□□□ 0.6
VPS45Q9NRW7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.79■□□□□ 0.6
VPS45Q9NRW7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VPS45Q9NRW7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
VPS45Q9NRW7 AL121772.3-201ENST00000610840 674 ntBASIC18.79■□□□□ 0.6
VPS45Q9NRW7 AL031008.1-201ENST00000619963 541 ntBASIC18.79■□□□□ 0.6
VPS45Q9NRW7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VPS45Q9NRW7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS45Q9NRW7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS45Q9NRW7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS45Q9NRW7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS45Q9NRW7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.79■□□□□ 0.6
VPS45Q9NRW7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.79■□□□□ 0.6
VPS45Q9NRW7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
VPS45Q9NRW7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
VPS45Q9NRW7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.78■□□□□ 0.6
VPS45Q9NRW7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VPS45Q9NRW7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS45Q9NRW7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS45Q9NRW7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS45Q9NRW7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
VPS45Q9NRW7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS45Q9NRW7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
VPS45Q9NRW7 KRT8P50-201ENST00000562022 1438 ntBASIC18.78■□□□□ 0.6
VPS45Q9NRW7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.78■□□□□ 0.6
VPS45Q9NRW7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS45Q9NRW7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
VPS45Q9NRW7 CHCHD2P8-201ENST00000429873 447 ntBASIC18.78■□□□□ 0.6
VPS45Q9NRW7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.78■□□□□ 0.6
VPS45Q9NRW7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.78■□□□□ 0.6
VPS45Q9NRW7 AC091304.2-201ENST00000564639 760 ntBASIC18.78■□□□□ 0.6
VPS45Q9NRW7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS45Q9NRW7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.78■□□□□ 0.6
VPS45Q9NRW7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.78■□□□□ 0.6
VPS45Q9NRW7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.78■□□□□ 0.6
VPS45Q9NRW7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS45Q9NRW7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS45Q9NRW7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VPS45Q9NRW7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS45Q9NRW7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS45Q9NRW7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.78■□□□□ 0.6
VPS45Q9NRW7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.78■□□□□ 0.6
VPS45Q9NRW7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
VPS45Q9NRW7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS45Q9NRW7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS45Q9NRW7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
VPS45Q9NRW7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VPS45Q9NRW7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS45Q9NRW7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS45Q9NRW7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS45Q9NRW7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VPS45Q9NRW7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS45Q9NRW7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VPS45Q9NRW7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS45Q9NRW7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.77■□□□□ 0.6
VPS45Q9NRW7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS45Q9NRW7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VPS45Q9NRW7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.77■□□□□ 0.6
VPS45Q9NRW7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VPS45Q9NRW7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.77■□□□□ 0.6
VPS45Q9NRW7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.77■□□□□ 0.6
VPS45Q9NRW7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VPS45Q9NRW7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.77■□□□□ 0.6
VPS45Q9NRW7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.77■□□□□ 0.6
VPS45Q9NRW7 AC104692.2-201ENST00000603054 253 ntBASIC18.77■□□□□ 0.6
VPS45Q9NRW7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.77■□□□□ 0.6
VPS45Q9NRW7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.77■□□□□ 0.6
VPS45Q9NRW7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS45Q9NRW7 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.77■□□□□ 0.6
VPS45Q9NRW7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VPS45Q9NRW7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.77■□□□□ 0.6
VPS45Q9NRW7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
VPS45Q9NRW7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VPS45Q9NRW7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VPS45Q9NRW7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VPS45Q9NRW7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
VPS45Q9NRW7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VPS45Q9NRW7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VPS45Q9NRW7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.76■□□□□ 0.59
VPS45Q9NRW7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.76■□□□□ 0.59
VPS45Q9NRW7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS45Q9NRW7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS45Q9NRW7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS45Q9NRW7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
VPS45Q9NRW7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
VPS45Q9NRW7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
VPS45Q9NRW7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.76■□□□□ 0.59
VPS45Q9NRW7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.76■□□□□ 0.59
VPS45Q9NRW7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.76■□□□□ 0.59
VPS45Q9NRW7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.76■□□□□ 0.59
VPS45Q9NRW7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS45Q9NRW7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS45Q9NRW7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms