Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 MIR662-201ENST00000384847 95 ntBASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 AC091076.1-201ENST00000610741 619 ntBASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
PRDM9Q9NQV7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PRDM9Q9NQV7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
PRDM9Q9NQV7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
PRDM9Q9NQV7 AC005332.1-201ENST00000577698 1310 ntBASIC17.21■□□□□ 0.34
PRDM9Q9NQV7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 AC135776.1-201ENST00000319817 2481 ntBASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 PCED1CP-201ENST00000419887 785 ntBASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 AL645929.1-201ENST00000420084 975 ntBASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 AC024563.2-201ENST00000603282 481 ntBASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 AL358472.4-201ENST00000633140 710 ntBASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 AC093010.1-201ENST00000473625 1624 ntBASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.2■□□□□ 0.34
PRDM9Q9NQV7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 AP000550.4-202ENST00000639755 178 ntBASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 PHGDH-209ENST00000641074 1780 ntBASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PRDM9Q9NQV7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRDM9Q9NQV7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.18■□□□□ 0.34
PRDM9Q9NQV7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRDM9Q9NQV7 LINC01126-201ENST00000623515 1646 ntBASIC17.18■□□□□ 0.34
PRDM9Q9NQV7 IER3-202ENST00000376377 1350 ntBASIC17.18■□□□□ 0.34
PRDM9Q9NQV7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.18■□□□□ 0.34
PRDM9Q9NQV7 FLJ13224-201ENST00000313737 1514 ntBASIC17.18■□□□□ 0.34
PRDM9Q9NQV7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRDM9Q9NQV7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.18■□□□□ 0.34
PRDM9Q9NQV7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRDM9Q9NQV7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.18■□□□□ 0.34
PRDM9Q9NQV7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRDM9Q9NQV7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRDM9Q9NQV7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.18■□□□□ 0.34
PRDM9Q9NQV7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRDM9Q9NQV7 KRT18P48-201ENST00000434763 852 ntBASIC17.18■□□□□ 0.34
PRDM9Q9NQV7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRDM9Q9NQV7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms