Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 FP475955.4-201ENST00000623131 1990 ntBASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 FAM87A-204ENST00000613235 858 ntBASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 KRT8P11-201ENST00000409686 1436 ntBASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TIMMDC1Q9NPL8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TIMMDC1Q9NPL8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TIMMDC1Q9NPL8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TIMMDC1Q9NPL8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TIMMDC1Q9NPL8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TIMMDC1Q9NPL8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TIMMDC1Q9NPL8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TIMMDC1Q9NPL8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TIMMDC1Q9NPL8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TIMMDC1Q9NPL8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.52■□□□□ 0.4
TIMMDC1Q9NPL8 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.52■□□□□ 0.4
TIMMDC1Q9NPL8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.52■□□□□ 0.4
TIMMDC1Q9NPL8 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.52■□□□□ 0.4
TIMMDC1Q9NPL8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.52■□□□□ 0.39
TIMMDC1Q9NPL8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TIMMDC1Q9NPL8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.39
TIMMDC1Q9NPL8 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.52■□□□□ 0.39
TIMMDC1Q9NPL8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
TIMMDC1Q9NPL8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TIMMDC1Q9NPL8 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TIMMDC1Q9NPL8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TIMMDC1Q9NPL8 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TIMMDC1Q9NPL8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TIMMDC1Q9NPL8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TIMMDC1Q9NPL8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
TIMMDC1Q9NPL8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 TSPY21P-201ENST00000433481 731 ntBASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 AC007663.1-201ENST00000438948 1240 ntBASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 AL353719.1-201ENST00000566847 864 ntBASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 AL512604.3-201ENST00000569583 964 ntBASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 AL023803.3-201ENST00000615559 522 ntBASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TIMMDC1Q9NPL8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms